Jatropha Genome Database

JcCA0081341.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0081341.30 - phase: 0 
         (471 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268523347|gb|FM894113.1|FM894113 FM894113 Jatropha curcas emb...   571   e-163

>gi|268523347|gb|FM894113.1|FM894113 FM894113 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_005093,
           mRNA sequence
          Length = 516

 Score =  571 bits (288), Expect = e-163
 Identities = 303/308 (98%)
 Strand = Plus / Minus

                                                                       
Query: 164 ggaggatgaaggagctgcaagccagtgaaggatcagcagatgaaaaactgcttcgcttgg 223
           ||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||
Sbjct: 516 ggaggatgaaggagctgcaagccagtgaaggatcagcagatgttatactgcttcgcttgg 457

                                                                       
Query: 224 gtgtggaaactggtggatgttctggtttccagtatgtattcgacttagacaataaaatca 283
           || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 456 gtttggaaactggtggatgttctggtttccagtatgtattcgacttagacaatgaaatca 397

                                                                       
Query: 284 atctggatgacagagtttttgagagagaaggaataaaattggtagttgacaatatttcat 343
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 atctggatgacagagtttttgagagagaaggaataaaattggtagttgacaatatttcat 337

                                                                       
Query: 344 atgattttgtgaaaggggcaactattgactatgttgaggagctgattcgttctgcttttg 403
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atgattttgtgaaaggggcaactattgactatgttgaggagctgattcgttctgcttttg 277

                                                                       
Query: 404 tagtgactataaatccaagcgcagttggtgggtgcagttgtaaaagctctttcatggtga 463
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tagtgactataaatccaagcgcagttggtgggtgcagttgtaaaagctctttcatggtga 217

                   
Query: 464 aacagtag 471
           ||||||||
Sbjct: 216 aacagtag 209