Jatropha Genome Database
- JcCA0081341.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0081341.10 + phase: 2 /partial
(211 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268516931|gb|FM892483.1|FM892483 FM892483 Jatropha curcas emb... 123 8e-29
gi|268522948|gb|FM896391.1|FM896391 FM896391 Jatropha curcas emb... 123 8e-29
gi|268524642|gb|FM895340.1|FM895340 FM895340 Jatropha curcas emb... 123 8e-29
gi|268525225|gb|FM895867.1|FM895867 FM895867 Jatropha curcas emb... 123 8e-29
>gi|268516931|gb|FM892483.1|FM892483 FM892483 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003046,
mRNA sequence
Length = 424
Score = 123 bits (62), Expect = 8e-29
Identities = 116/134 (86%)
Strand = Plus / Plus
Query: 74 tttactgggacaattgagcttcagattggactgaagaactatgatccccaaaaagacaag 133
||||||| |||||||||||| |||||||||||||||||||||||||| ||||| || |||
Sbjct: 128 tttactgagacaattgagctccagattggactgaagaactatgatcctcaaaaggataag 187
Query: 134 agatccagcggctctgttaagcttcctcacattcctcgccccaagatgaaaatctgcatg 193
| | ||| |||||||| ||| | |||||||| ||||| || |||||||| || ||||||
Sbjct: 188 cgtttcagtggctctgtgaagttgcctcacatccctcgtcctaagatgaagatttgcatg 247
Query: 194 cttggtgatgctca 207
||||| ||||||||
Sbjct: 248 cttggagatgctca 261
>gi|268522948|gb|FM896391.1|FM896391 FM896391 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003605,
mRNA sequence
Length = 510
Score = 123 bits (62), Expect = 8e-29
Identities = 116/134 (86%)
Strand = Plus / Plus
Query: 74 tttactgggacaattgagcttcagattggactgaagaactatgatccccaaaaagacaag 133
||||||| |||||||||||| |||||||||||||||||||||||||| ||||| || |||
Sbjct: 69 tttactgagacaattgagctccagattggactgaagaactatgatcctcaaaaggataag 128
Query: 134 agatccagcggctctgttaagcttcctcacattcctcgccccaagatgaaaatctgcatg 193
| | ||| |||||||| ||| | |||||||| ||||| || |||||||| || ||||||
Sbjct: 129 cgtttcagtggctctgtgaagttgcctcacatccctcgtcctaagatgaagatttgcatg 188
Query: 194 cttggtgatgctca 207
||||| ||||||||
Sbjct: 189 cttggagatgctca 202
>gi|268524642|gb|FM895340.1|FM895340 FM895340 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002148,
mRNA sequence
Length = 507
Score = 123 bits (62), Expect = 8e-29
Identities = 116/134 (86%)
Strand = Plus / Plus
Query: 74 tttactgggacaattgagcttcagattggactgaagaactatgatccccaaaaagacaag 133
||||||| |||||||||||| |||||||||||||||||||||||||| ||||| || |||
Sbjct: 119 tttactgagacaattgagctccagattggactgaagaactatgatcctcaaaaggataag 178
Query: 134 agatccagcggctctgttaagcttcctcacattcctcgccccaagatgaaaatctgcatg 193
| | ||| |||||||| ||| | |||||||| ||||| || |||||||| || ||||||
Sbjct: 179 cgtttcagtggctctgtgaagttgcctcacatccctcgtcctaagatgaagatttgcatg 238
Query: 194 cttggtgatgctca 207
||||| ||||||||
Sbjct: 239 cttggagatgctca 252
>gi|268525225|gb|FM895867.1|FM895867 FM895867 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002864,
mRNA sequence
Length = 434
Score = 123 bits (62), Expect = 8e-29
Identities = 116/134 (86%)
Strand = Plus / Plus
Query: 74 tttactgggacaattgagcttcagattggactgaagaactatgatccccaaaaagacaag 133
||||||| |||||||||||| |||||||||||||||||||||||||| ||||| || |||
Sbjct: 181 tttactgagacaattgagctccagattggactgaagaactatgatcctcaaaaggataag 240
Query: 134 agatccagcggctctgttaagcttcctcacattcctcgccccaagatgaaaatctgcatg 193
| | ||| |||||||| ||| | |||||||| ||||| || |||||||| || ||||||
Sbjct: 241 cgtttcagtggctctgtgaagttgcctcacatccctcgtcctaagatgaagatttgcatg 300
Query: 194 cttggtgatgctca 207
||||| ||||||||
Sbjct: 301 cttggagatgctca 314