Jatropha Genome Database

JcCA0081161.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0081161.20 - phase: 0 
         (1104 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091051|gb|GT228478.1|GT228478 JC043 Jatropha seeds from fr...   254   2e-67

>gi|262091051|gb|GT228478.1|GT228478 JC043 Jatropha seeds from fruits
            at three stages of maturation Jatropha curcas cDNA clone
            Contig43 5', mRNA sequence
          Length = 418

 Score =  254 bits (128), Expect = 2e-67
 Identities = 176/192 (91%)
 Strand = Plus / Minus

                                                                        
Query: 913  gcatttgggtgtacaattagtggagcagggcctacagctgtggccgtgattgataatgag 972
            |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 378  gcatttgggtgtacaattagtggagcagggcctacagctgtggcggtgattgatgatgag 319

                                                                        
Query: 973  gagagaggaaaggagattggggagaggatggtggaggcatttttgaaggaaggaaatttg 1032
            || ||||||||||||||||| |||| |||||||||||| ||| |||| ||||||||||||
Sbjct: 318  gaaagaggaaaggagattggagagaagatggtggaggcctttctgaaagaaggaaatttg 259

                                                                        
Query: 1033 aaggctgtatctctggtgaagaggctagatagagttggtgctaggcttattggcagtgtt 1092
            ||||||||  || ||||||||||||||| ||||||||||||||||||| ||| |||||||
Sbjct: 258  aaggctgtggctatggtgaagaggctagttagagttggtgctaggctttttgtcagtgtt 199

                        
Query: 1093 ccagccagataa 1104
            ||| || |||||
Sbjct: 198  ccaacctgataa 187