Jatropha Genome Database

JcCA0081131.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0081131.10 - phase: 0 
         (801 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524802|gb|FM895500.1|FM895500 FM895500 Jatropha curcas emb...   387   e-107
gi|268524786|gb|FM895484.1|FM895484 FM895484 Jatropha curcas emb...   250   2e-66

>gi|268524802|gb|FM895500.1|FM895500 FM895500 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002431,
           mRNA sequence
          Length = 541

 Score =  387 bits (195), Expect = e-107
 Identities = 198/199 (99%)
 Strand = Plus / Minus

                                                                       
Query: 600 aatgtatctgtcagatgttgaagaagggggtgagacagtgtttcctgctgcccaggcaaa 659
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 536 aatgtatctgtcagatgttgaagaagggggtgagacagtgtttcctgctgcccaggcata 477

                                                                       
Query: 660 catcagctctgtaccatggtggaatgagttgtcagaatgtggcaaacggggtctttcagt 719
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 catcagctctgtaccatggtggaatgagttgtcagaatgtggcaaacggggtctttcagt 417

                                                                       
Query: 720 gaaaccgaagatgggcaatgcattgctgttctggagcacaaggcctgatgctacactaga 779
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gaaaccgaagatgggcaatgcattgctgttctggagcacaaggcctgatgctacactaga 357

                              
Query: 780 cccttcaagtttgcatggt 798
           |||||||||||||||||||
Sbjct: 356 cccttcaagtttgcatggt 338


>gi|268524786|gb|FM895484.1|FM895484 FM895484 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002413,
           mRNA sequence
          Length = 562

 Score =  250 bits (126), Expect = 2e-66
 Identities = 132/134 (98%)
 Strand = Plus / Minus

                                                                       
Query: 665 gctctgtaccatggtggaatgagttgtcagaatgtggcaaacggggtctttcagtgaaac 724
           ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gctctgtaccatgttggtatgagttgtcagaatgtggcaaacggggtctttcagtgaaac 503

                                                                       
Query: 725 cgaagatgggcaatgcattgctgttctggagcacaaggcctgatgctacactagaccctt 784
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cgaagatgggcaatgcattgctgttctggagcacaaggcctgatgctacactagaccctt 443

                         
Query: 785 caagtttgcatggt 798
           ||||||||||||||
Sbjct: 442 caagtttgcatggt 429