Jatropha Genome Database
- JcCA0080721.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0080721.10 - phase: 0
(1497 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268522445|gb|FM894590.1|FM894590 FM894590 Jatropha curcas emb... 747 0.0
gi|268526106|gb|FM891362.1|FM891362 FM891362 Jatropha curcas emb... 507 e-143
>gi|268522445|gb|FM894590.1|FM894590 FM894590 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000383,
mRNA sequence
Length = 524
Score = 747 bits (377), Expect = 0.0
Identities = 487/520 (93%), Gaps = 3/520 (0%)
Strand = Plus / Plus
Query: 761 ctttaattagtgaaggcccgtggatatttgttggcttgccaaattctgttaaggtgtgga 820
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 4 ctttaattagtgaaggcccgtggatatttgttggcttgccaaattgtgttaaggcatgga 63
Query: 821 accttgaaacaggggccgactttagtctcaatgaaccagtagggcaagtttctgctatag 880
|||| ||||||||||| || ||||||||| |||||||||| |||||||||| |||||| |
Sbjct: 64 acctcgaaacaggggctgaatttagtctcgatgaaccagttgggcaagtttttgctatgg 123
Query: 881 ctgttgctcttgatatgctttttgctggggcacaggatggttccattttggcatggaaag 940
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 124 atgttgctgttgatatgctttttgctggggcacaggatggttccattttggcatggcaag 183
Query: 941 gc-agtact-gagaacccagtggctccttttcaactggccaaatctttgaaaggccacac 998
| |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 184 ggtagtactngagaacccaatggctccatttcaactggccaaatctttgaaaggccacac 243
Query: 999 tggcgcagtgacatgcgtaactgttggagataaaaggctgtactctggttccattgacaa 1058
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 244 tggcacagtgacatgcgtaactgttggagataaaaggctgtactctggttccatggacaa 303
Query: 1059 tacaataagggtgtgggaactcagtact-ttacagtgtattcatactctagatgggcata 1117
||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 304 tacaataagagtgtgggatctcagtactcttacagtgtattcatactctaaatgggcata 363
Query: 1118 ctgatgctgtgatgtcacttatttgctgggaggagtatctgttatcttgttcattggatc 1177
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 364 ctgatgctgtgatgtctcttatttgctgggaggagtatctgttatcttgtncattggatc 423
Query: 1178 agactataaaagtctgggctgctactgaggagggcaacatagaagtggtctatacacata 1237
|||| ||||||||||||||||||||||| ||||||||| || ||||| ||||||||||||
Sbjct: 424 agacaataaaagtctgggctgctactgaagagggcaacttacaagtgatctatacacata 483
Query: 1238 acgaggaacatggtgctattgctctttgcgggatacacga 1277
|||||||||||||||||||||||||||| |||||| ||||
Sbjct: 484 acgaggaacatggtgctattgctctttgtgggatatacga 523
>gi|268526106|gb|FM891362.1|FM891362 FM891362 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001634,
mRNA sequence
Length = 274
Score = 507 bits (256), Expect = e-143
Identities = 270/272 (99%), Gaps = 2/272 (0%)
Strand = Plus / Plus
Query: 1204 gaggagggcaacatagaagtggtctatacacataacgaggaacatggtgctattgctctt 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gaggagggcaacatagaagtggtctatacacataacgaggaacatggtgctattgctctt 64
Query: 1264 tgcgggatacacgacacagaagtcaaaccaattttgttatgctcttgcaatgacaattcg 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tgcgggatacacgacacagaagtcaaaccaattttgttatgctcttgcaatgacaattcg 124
Query: 1324 gttcatctgtatgacctgccatcattcaatgacagaggcagaattttctcaaaacgagaa 1383
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 125 gttcatctgtatgacctgccatcattcaatgacagaggca-aattttctcaaaacgagaa 183
Query: 1384 atcggagcattgcacgtgggtccatacggcttatttttctctggcgacagcacaggaatg 1443
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 184 atcggagcattgcacgtgggtccatacggctta-ttttctctggcgacagcacaggaatg 242
Query: 1444 ctcactgtctggaagctggtggaatcacataa 1475
||||||||||||||||||||||||||||||||
Sbjct: 243 ctcactgtctggaagctggtggaatcacataa 274