Jatropha Genome Database

JcCA0075831.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0075831.10 - phase: 0 
         (708 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268523609|gb|FM892142.1|FM892142 FM892142 Jatropha curcas emb...   928   0.0  

>gi|268523609|gb|FM892142.1|FM892142 FM892142 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_002634,
           mRNA sequence
          Length = 523

 Score =  928 bits (468), Expect = 0.0
 Identities = 478/480 (99%), Gaps = 1/480 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagccgtaggtgtagttggtagtggtggactatgcgtccctgcgtcatccattaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44  atggaagccgtaggtgtagttggtagtggtggactatgcgtccctgcgtcatccattaat 103

                                                                       
Query: 61  cgctcatcaacccacacaacttacagcttatccttcgtccccggcaataagcttggccta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 cgctcatcaacccacacaacttacagcttatccttcgtccccggcaataagcttggccta 163

                                                                       
Query: 121 cgcagtagtcacctagcagcattccattcaccatcccatcttttctcttattccccttca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 cgcagtagtcacctagcagcattccattcaccatcccatcttttctcttattccccttca 223

                                                                       
Query: 181 cgtccttataatgctaagcatcgcaagcctaccaaaacccatatctttcttcctcatttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 cgtccttataatgctaagcatcgcaagcctaccaaaacccatatctttcttcctcatttg 283

                                                                       
Query: 241 gttgcttccctggaacaggttgaagagacatatatcatggtcaagcctgacggcgttcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gttgcttccctggaacaggttgaagagacatatatcatggtcaagcctgacggcgttcaa 343

                                                                       
Query: 301 cgtggccttgttggagaaataatctcaagatttgagaagaaaggatttaaacttactggc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 cgtggccttgttggagaaataatctcaagatttgagaagaaaggatttaaacttactggc 403

                                                                       
Query: 361 ttgaagcttttccaatgccctaaggagttggcagaggaacattataaggatctcaaggct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ttgaagcttttccaatgccctaaggagttggcagaggaacattataaggatctcaaggct 463

                                                                       
Query: 421 ag-acctttcttccctaagttgatcaattacataacttcaggtccagttgtgtgtatggc 479
           || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 464 agaacctttcttccctaagtcgatcaattacataacttcaggtccagttgtgtgtatggc 523