Jatropha Genome Database
- JcCA0075601.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0075601.10 - phase: 0
(1089 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268517868|gb|FM893243.1|FM893243 FM893243 Jatropha curcas emb... 559 e-159
gi|268525419|gb|FM896061.1|FM896061 FM896061 Jatropha curcas emb... 76 9e-14
>gi|268517868|gb|FM893243.1|FM893243 FM893243 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb2_004023,
mRNA sequence
Length = 544
Score = 559 bits (282), Expect = e-159
Identities = 285/286 (99%)
Strand = Plus / Minus
Query: 804 tagcattcctgaaatcaggaatcatgagtggtttctgaagaatcttccggcagatctcat 863
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tagcattccggaaatcaggaatcatgagtggtttctgaagaatcttccggcagatctcat 485
Query: 864 ggacgaaaatatgggcaaacagtttgaagagcctgatcagccaatgcagagccttgatga 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggacgaaaatatgggcaaacagtttgaagagcctgatcagccaatgcagagccttgatga 425
Query: 924 gatcatgcaaataatatccgaagccaccataccagcagctggcacccgtagtctcaatca 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gatcatgcaaataatatccgaagccaccataccagcagctggcacccgtagtctcaatca 365
Query: 984 gtatttgactggcagcctagatattgatgatgacatggaggaggacctagagactgatcc 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gtatttgactggcagcctagatattgatgatgacatggaggaggacctagagactgatcc 305
Query: 1044 tgaacttgacatggatagcagtggagagatagtgtatgcaatgtga 1089
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tgaacttgacatggatagcagtggagagatagtgtatgcaatgtga 259
>gi|268525419|gb|FM896061.1|FM896061 FM896061 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003193,
mRNA sequence
Length = 657
Score = 75.8 bits (38), Expect = 9e-14
Identities = 233/298 (78%)
Strand = Plus / Plus
Query: 451 gatggaagccaagcacctcgtttaaagatttgtgactttggttactctaagtcatcggtg 510
||||| |||| |||||| ||| | || || ||||| |||||||| ||||||||||| ||
Sbjct: 116 gatggcagcccagcaccacgtctgaaaatctgtgattttggttattctaagtcatccttg 175
Query: 511 ctccattcacaaccaaactctactgttggaactcctgcgtatattgcacctgaagtgtta 570
|| |||||| ||| || || || ||||| ||||| || |||||||| || || || |
Sbjct: 176 ctgcattcaagacccaaatccacagttggcactccggcttatattgccccagaggttctt 235
Query: 571 cttaagaaggaatatgatggcaagattgcagatgtatggtcatgtggggtaacattatat 630
|| || ||||||||||||||||| |||||||||||||| ||||| || || | |||
Sbjct: 236 tctaggagagaatatgatggcaagatggcagatgtatggtcctgtggagtgactctgtat 295
Query: 631 gtaatgttggtgggagcatatccttttgaggaccctgaggagcctaagaatttccgcagg 690
|| ||| |||| |||||||| || ||||| || | ||||| || ||||||||| | | |
Sbjct: 296 gttatgctggtaggagcatacccatttgaagatcaagaggacccaaagaatttcaggaag 355
Query: 691 acaattcatcgaattttgaatgtccagtactcgattcctgactatgttcatatatctc 748
||||| || |||| || |||||||||| ||| ||||| |||||||| |||||||
Sbjct: 356 acaatcaatagaataatggctgtccagtacaagatccctgattatgttcacatatctc 413