Jatropha Genome Database

JcCA0075511.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0075511.20 + phase: 1 /TE
         (1701 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518919|gb|FM887386.1|FM887386 FM887386 Jatropha curcas emb...   127   4e-29

>gi|268518919|gb|FM887386.1|FM887386 FM887386 Jatropha curcas embryo
            35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000575,
            mRNA sequence
          Length = 105

 Score =  127 bits (64), Expect = 4e-29
 Identities = 88/97 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1088 ggagtttccaagagatcttatggagtngccattnagagaatttgatgttattctgggtat 1147
            ||||||| || |||| ||||||||||  ||||| ||||||||||||||||||||||||||
Sbjct: 9    ggagtttacaggagaccttatggagttaccattcagagaatttgatgttattctgggtat 68

                                                 
Query: 1148 ggattgnctatctagacatcatgctatagttgattgt 1184
            |||||| ||||| |||||||| |||||||||||||||
Sbjct: 69   ggattggctatccagacatcaggctatagttgattgt 105