Jatropha Genome Database

JcCA0071361.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0071361.10 + phase: 0 
         (627 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522602|gb|FM896643.1|FM896643 FM896643 Jatropha curcas emb...   418   e-117

>gi|268522602|gb|FM896643.1|FM896643 FM896643 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003913,
           mRNA sequence
          Length = 227

 Score =  418 bits (211), Expect = e-117
 Identities = 225/227 (99%), Gaps = 2/227 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  aagaagctagtgtctcttctggtaacagagtagttcaagatttttgtggcataaatccag 100
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aagaagctagtgtctcttctggtaacagagtagttcaagatttttgtggcataaatccag 60

                                                                       
Query: 101 tggttaaccagcaacaacaaggacagaaggtcaagaagaaaagaagccttccaggaaacc 160
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tggttaaccagcaacaacaaggacagaaggtcaagaagaaaagaagccttccaggaaacc 120

                                                                       
Query: 161 cagacccagatgcagaagtgatagcattatctccaaagacttta-ttagctacaaataga 219
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 cagacccagatgcagaagtgatagcattatctccaaagactttatttagctacaaataga 180

                                                          
Query: 220 ttcgtatgtga-gatctgtaacaaaggttttcaaagagatcagaatc 265
           ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcgtatgtgaggatctgtaacaaaggttttcaaagagatcagaatc 227