Jatropha Genome Database

JcCA0070561.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0070561.10 + phase: 0 /partial
         (1647 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268520377|gb|FM890225.1|FM890225 FM890225 Jatropha curcas emb...   533   e-151
gi|268526088|gb|FM891344.1|FM891344 FM891344 Jatropha curcas emb...   450   e-126

>gi|268520377|gb|FM890225.1|FM890225 FM890225 Jatropha curcas embryo
            35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_004041,
            mRNA sequence
          Length = 559

 Score =  533 bits (269), Expect = e-151
 Identities = 275/277 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1371 tgcatttgctggagacagtgataagggaatgcagtacgtgttaaatggttgcaaaagact 1430
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 559  tgcatttgctggagacagtgataagggaatgcagtacgtgttaaatggtggcaaaagact 500

                                                                        
Query: 1431 tcgcaagttagagataagggatagcccttttggtaatgcggcacttctaatggacgtggg 1490
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499  tcgcaagttagagataagggatagcccttttggtaatgcggcacttctaatggacgtggg 440

                                                                        
Query: 1491 aaagtatgaaacaatgcgatccctttggatgtcgtcctgtgaagtaactcttggaggctg 1550
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 439  aaagtatgaaacaatgcgatccctttggatgtcgtcctgtgaagtgactcttggaggctg 380

                                                                        
Query: 1551 caagacccttgcgaagaagatgccaaggctcaatgtagagatcatgaatgagaatgagca 1610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379  caagacccttgcgaagaagatgccaaggctcaatgtagagatcatgaatgagaatgagca 320

                                                 
Query: 1611 ggcagaatttggtgttgatgatagccagaaagtagat 1647
            |||||||||||||||||||||||||||||||||||||
Sbjct: 319  ggcagaatttggtgttgatgatagccagaaagtagat 283


>gi|268526088|gb|FM891344.1|FM891344 FM891344 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001607,
           mRNA sequence
          Length = 232

 Score =  450 bits (227), Expect = e-126
 Identities = 227/227 (100%)
 Strand = Plus / Plus

                                                                       
Query: 709 gtagggtcttatgtacatgatccagattctgagacctataataaattagtgactgctatt 768
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtagggtcttatgtacatgatccagattctgagacctataataaattagtgactgctatt 60

                                                                       
Query: 769 caaaagtgtaaatcagtcaggagtttgtctgggtttttggaagttgctccccactgccta 828
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  caaaagtgtaaatcagtcaggagtttgtctgggtttttggaagttgctccccactgccta 120

                                                                       
Query: 829 ccagcttttcacttgatttgcccgaccctgacctccttgaacctgagttatgctccagga 888
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccagcttttcacttgatttgcccgaccctgacctccttgaacctgagttatgctccagga 180

                                                          
Query: 889 attcaaggtagtgagcttacaaagctaattcgccactgtaggaaact 935
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attcaaggtagtgagcttacaaagctaattcgccactgtaggaaact 227