Jatropha Genome Database

JcCA0066671.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0066671.10 - phase: 2 /partial
         (235 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268521504|gb|FM894256.1|FM894256 FM894256 Jatropha curcas emb...   375   e-104

>gi|268521504|gb|FM894256.1|FM894256 FM894256 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004562,
           mRNA sequence
          Length = 461

 Score =  375 bits (189), Expect = e-104
 Identities = 189/189 (100%)
 Strand = Plus / Minus

                                                                       
Query: 2   ttttttaattctcatgatcgagaatttcatgtagcatctcttccatataagcctgatttc 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttttttaattctcatgatcgagaatttcatgtagcatctcttccatataagcctgatttc 402

                                                                       
Query: 62  aaggttatgccagagggttgggatggtaccatcaaagacctggatgaagtccactatgag 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aaggttatgccagagggttgggatggtaccatcaaagacctggatgaagtccactatgag 342

                                                                       
Query: 122 atatccatgaaagaggatgaaatgctgtatcaagaatttgtccaaaagatgaacttcaac 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 atatccatgaaagaggatgaaatgctgtatcaagaatttgtccaaaagatgaacttcaac 282

                    
Query: 182 aaaatgaaa 190
           |||||||||
Sbjct: 281 aaaatgaaa 273