Jatropha Genome Database

JcCA0065711.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0065711.10 + phase: 0 
         (834 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525373|gb|FM896015.1|FM896015 FM896015 Jatropha curcas emb...   912   0.0  

>gi|268525373|gb|FM896015.1|FM896015 FM896015 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003144,
           mRNA sequence
          Length = 460

 Score =  912 bits (460), Expect = 0.0
 Identities = 460/460 (100%)
 Strand = Plus / Plus

                                                                       
Query: 231 tagatctttatatagatgcttgattttctttgctgtagggttctttttgggtttgttctt 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tagatctttatatagatgcttgattttctttgctgtagggttctttttgggtttgttctt 60

                                                                       
Query: 291 gtttggtcctttggaaaatgatgtccagaatcacgacttctccttcgagatcaagccgcc 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtttggtcctttggaaaatgatgtccagaatcacgacttctccttcgagatcaagccgcc 120

                                                                       
Query: 351 gcatgtcaatgttcaattggatgacggcggcggcgataatcgcggtattaagcgagacgt 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcatgtcaatgttcaattggatgacggcggcggcgataatcgcggtattaagcgagacgt 180

                                                                       
Query: 411 ttttgccctaaattctgtgagtttgggggttgatacgcaagttaattacatttcgagatt 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttttgccctaaattctgtgagtttgggggttgatacgcaagttaattacatttcgagatt 240

                                                                       
Query: 471 tgattatgttccgaggaagcaattaatcgtgattacgccaacatataatcgtgctttgca 530
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgattatgttccgaggaagcaattaatcgtgattacgccaacatataatcgtgctttgca 300

                                                                       
Query: 531 ggccttctttctgaatagattagggcaagttctaaggctagtgcagcctccgttactgtg 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggccttctttctgaatagattagggcaagttctaaggctagtgcagcctccgttactgtg 360

                                                                       
Query: 591 gattgtggtggaaatgaaaaccgcctctgtggagacggcagaaattttgaggaagacggg 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gattgtggtggaaatgaaaaccgcctctgtggagacggcagaaattttgaggaagacggg 420

                                                   
Query: 651 agctatgtataggcatttggtttgcgagagaaattcgact 690
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agctatgtataggcatttggtttgcgagagaaattcgact 460