Jatropha Genome Database

JcCA0060881.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0060881.10 + phase: 0 /partial
         (279 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522532|gb|FM896536.1|FM896536 FM896536 Jatropha curcas emb...   474   e-134

>gi|268522532|gb|FM896536.1|FM896536 FM896536 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003769,
           mRNA sequence
          Length = 595

 Score =  474 bits (239), Expect = e-134
 Identities = 239/239 (100%)
 Strand = Plus / Plus

                                                                       
Query: 41  gattgtatctccatgctgtaactgaaacaaagcttgtagttgatacttcaagaggagaaa 100
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gattgtatctccatgctgtaactgaaacaaagcttgtagttgatacttcaagaggagaaa 376

                                                                       
Query: 101 ctttgcgcatcaattttgatgtaacttttccagccctaccatgttctattctcagccttg 160
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ctttgcgcatcaattttgatgtaacttttccagccctaccatgttctattctcagccttg 436

                                                                       
Query: 161 atgccatggacatcagtggagagcagcatcttgatgtcaaacacgatataatcaagaaaa 220
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atgccatggacatcagtggagagcagcatcttgatgtcaaacacgatataatcaagaaaa 496

                                                                      
Query: 221 gactggattctcatggaaatgtaatagaagcacggcaagatggtataggtgctcctaag 279
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gactggattctcatggaaatgtaatagaagcacggcaagatggtataggtgctcctaag 555