Jatropha Genome Database

JcCA0060621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0060621.10 + phase: 2 /partial
         (484 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268517384|gb|FM887326.1|FM887326 FM887326 Jatropha curcas emb...   391   e-109

>gi|268517384|gb|FM887326.1|FM887326 FM887326 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000504,
           mRNA sequence
          Length = 564

 Score =  391 bits (197), Expect = e-109
 Identities = 204/205 (99%), Gaps = 1/205 (0%)
 Strand = Plus / Plus

                                                                       
Query: 193 aaaggtcaaggttccc-acgtttcttgtgcctgcaacccaaaaggtatggatggatgtat 251
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaaggtcaaggttcccnacgtttcttgtgcctgcaacccaaaaggtatggatggatgtat 60

                                                                       
Query: 252 atagtttaccagtaccggggtctggtggcaggacttgctcccagatttttgaagaagctg 311
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atagtttaccagtaccggggtctggtggcaggacttgctcccagatttttgaagaagctg 120

                                                                       
Query: 312 gttgtgacacacctgcaagtcctagttgtggtgcatgcttgggaggccccaaggacactt 371
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttgtgacacacctgcaagtcctagttgtggtgcatgcttgggaggccccaaggacactt 180

                                    
Query: 372 atgcacgcatgaatgaaccaatggt 396
           |||||||||||||||||||||||||
Sbjct: 181 atgcacgcatgaatgaaccaatggt 205