Jatropha Genome Database

JcCA0046101.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0046101.20 - phase: 0 /pseudo/partial
         (185 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518777|gb|FM889020.1|FM889020 FM889020 Jatropha curcas emb...   309   6e-85

>gi|268518777|gb|FM889020.1|FM889020 FM889020 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002573,
           mRNA sequence
          Length = 467

 Score =  309 bits (156), Expect = 6e-85
 Identities = 156/156 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttctgctttgcgggggcaaccttagcaggggtcgaatgctctgactgagaaaatcgaatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ttctgctttgcgggggcaaccttagcaggggtcgaatgctctgactgagaaaatcgaatc 97

                                                                       
Query: 61  aagacttgcatgaggacagtaacaattgcaagtgcggatgccgacaatgcaatccccttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  aagacttgcatgaggacagtaacaattgcaagtgcggatgccgacaatgcaatccccttc 37

                                               
Query: 121 cacgatgaaaaaagtgaagaccattggaggaacttc 156
           ||||||||||||||||||||||||||||||||||||
Sbjct: 36  cacgatgaaaaaagtgaagaccattggaggaacttc 1