Jatropha Genome Database
- JcCA0044421.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0044421.10 + phase: 0
(1686 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268517550|gb|FM889261.1|FM889261 FM889261 Jatropha curcas emb... 1023 0.0
gi|268517956|gb|FM893331.1|FM893331 FM893331 Jatropha curcas emb... 406 e-113
>gi|268517550|gb|FM889261.1|FM889261 FM889261 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002876,
mRNA sequence
Length = 516
Score = 1023 bits (516), Expect = 0.0
Identities = 516/516 (100%)
Strand = Plus / Plus
Query: 337 ggtcaaccggttgggactattgctgctttggacaattctgaagagaaacttaattatgat 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcaaccggttgggactattgctgctttggacaattctgaagagaaacttaattatgat 60
Query: 397 caggtgtttgtgagagactttatcccaagtgcaatggcatttttgatgaatggagaacct 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caggtgtttgtgagagactttatcccaagtgcaatggcatttttgatgaatggagaacct 120
Query: 457 gaaatagtcaggaatttcattttgaagactcttcgccttcagtcgtgggagaaaaagatt 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaatagtcaggaatttcattttgaagactcttcgccttcagtcgtgggagaaaaagatt 180
Query: 517 gacagattccaattaggagaaggagtaatgcctgctagttttaaagtactccatgatcca 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacagattccaattaggagaaggagtaatgcctgctagttttaaagtactccatgatcca 240
Query: 577 gtgagaaacaatgagactttgatggcagatttcggagagagtgcaattggaagagttgcc 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgagaaacaatgagactttgatggcagatttcggagagagtgcaattggaagagttgcc 300
Query: 637 cctgttgactctggattttggtggattatattgctccgagcatacactaagtctacgggc 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctgttgactctggattttggtggattatattgctccgagcatacactaagtctacgggc 360
Query: 697 gatatctcattagctgaattgccagaatgtcagaagggtatgcgcctaattttgagttta 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatatctcattagctgaattgccagaatgtcagaagggtatgcgcctaattttgagttta 420
Query: 757 tgcctttcagagggctttgacacattcccaactcttctttgtgctgatggatgctgcatg 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcctttcagagggctttgacacattcccaactcttctttgtgctgatggatgctgcatg 480
Query: 817 attgatcgtaggatgggtgtttatgggtatccaatt 852
||||||||||||||||||||||||||||||||||||
Sbjct: 481 attgatcgtaggatgggtgtttatgggtatccaatt 516
>gi|268517956|gb|FM893331.1|FM893331 FM893331 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004133,
mRNA sequence
Length = 299
Score = 406 bits (205), Expect = e-113
Identities = 212/213 (99%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 1475 gactgcagaaagataattggcctgaatactatgatgggaaactcgggcgatacatcggaa 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gactgcagaaagataattggcctgaatactatgatgggaaactcgggcgatacatcggaa 64
Query: 1535 agcaggcacgcaaaaatcaaacctggtctattgcagg-ttatttagtagcaaaaatgatg 1593
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 65 agcaggcacgcaaaaatcaaacctggtctattgcaggcttatttagtagcaaaaatgatg 124
Query: 1594 ctggaagacccctcccatgtgggtatggtgtcacttgaggaagataaacaaatgaagcct 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ctggaagacccctcccatgtgggtatggtgtcacttgaggaagataaacaaatgaagcct 184
Query: 1654 cttataagaagatcaaattcttggactttctaa 1686
|||||||||||||||||||||||||||||||||
Sbjct: 185 cttataagaagatcaaattcttggactttctaa 217