Jatropha Genome Database

JcCA0028741.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0028741.10 - phase: 0 
         (582 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268521452|gb|FM894204.1|FM894204 FM894204 Jatropha curcas emb...   172   3e-43

>gi|268521452|gb|FM894204.1|FM894204 FM894204 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004503,
           mRNA sequence
          Length = 569

 Score =  172 bits (87), Expect = 3e-43
 Identities = 100/103 (97%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgattgctgctgttgatgccattcgagtaaaaggggattccattggtggagtggt-cac 59
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 467 atgattgctgctgttgatgccattcgagtaaaaggggattccatcggtggagtggtacac 526

                                                      
Query: 60  atgcattgtgaggaatgccccatgtgggcttggttcgccagta 102
           |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 527 atgcatggtgaggaatgccccatgtgggcttggttcgccagta 569