Jatropha Genome Database

JcCA0020841.50
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0020841.50 - phase: 0 
         (1467 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522537|gb|FM896541.1|FM896541 FM896541 Jatropha curcas emb...   141   3e-33
gi|268525157|gb|FM895799.1|FM895799 FM895799 Jatropha curcas emb...    74   5e-13

>gi|268522537|gb|FM896541.1|FM896541 FM896541 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003774,
            mRNA sequence
          Length = 592

 Score =  141 bits (71), Expect = 3e-33
 Identities = 71/71 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1397 aggagtgtgaggcacaagcagctctcaaagagggatcaatcctagaaaataaaaagacga 1456
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592  aggagtgtgaggcacaagcagctctcaaagagggatcaatcctagaaaataaaaagacga 533

                       
Query: 1457 caaatgcttga 1467
            |||||||||||
Sbjct: 532  caaatgcttga 522


>gi|268525157|gb|FM895799.1|FM895799 FM895799 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002788,
            mRNA sequence
          Length = 590

 Score = 73.8 bits (37), Expect = 5e-13
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1186 aaagattttagagctgccatagaatgctattcccagttcattgatgttgggaccatggtt 1245
            |||||||||| | ||||||| || || |||||||||||||| || || || || ||||||
Sbjct: 186  aaagattttaaaactgccattgactgttattcccagttcatagacgtaggaacaatggtt 245

                                         
Query: 1246 tctccaactgtttatgcacgccgaagtct 1274
            ||||||||||||| |||||| || |||||
Sbjct: 246  tctccaactgtttttgcacggcgcagtct 274