Jatropha Genome Database

JcCA0020831.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0020831.10 - phase: 0 
         (1377 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268520267|gb|FM890115.1|FM890115 FM890115 Jatropha curcas emb...   801   0.0  

>gi|268520267|gb|FM890115.1|FM890115 FM890115 Jatropha curcas embryo
            35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003915,
            mRNA sequence
          Length = 511

 Score =  801 bits (404), Expect = 0.0
 Identities = 419/423 (99%), Gaps = 2/423 (0%)
 Strand = Plus / Plus

                                                                        
Query: 957  aaaggatggtagtgttagtgagagaaattttgggatatttaatggagatggatctaaagt 1016
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    aaaggatggtagtgttagtgagagaaattttgggatatttaatggagatggatctaaagt 60

                                                                        
Query: 1017 atatgatgtggatttgagctgccaattctgtagcaatggagggacacttgaattcagcga 1076
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   atatgatgtggatttgagctgccaattctgtagcaatggagggacacttgaattcagcga 120

                                                                        
Query: 1077 gaagatatcaaatggggtaagaggaccttcagtctggtgtgtggctaagccacattcaga 1136
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gaagatatcaaatggggtaagaggaccttcagtctggtgtgtggctaagccacattcaga 180

                                                                        
Query: 1137 tgagaaggtgcttcaagctgtattggacttctgctgtggaccaggtggagtggattgcag 1196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tgagaaggtgcttcaagctgtattggacttctgctgtggaccaggtggagtggattgcag 240

                                                                        
Query: 1197 ggagatttatcaaagtggtgattgttttgcaccagaaaaggtccatgcacatgcttcata 1256
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gcagatttatcaaagtggtgattgttttgcaccagaaaaggtccatgcacatgcttcata 300

                                                                        
Query: 1257 tgccatgaatgcttattatcagatgcatggaagaaactactggaactgtgacttcaaagg 1316
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  tgccatgaatgcttattatcagatgcatggaagaaactactggaactgtgacttcaaagg 360

                                                                        
Query: 1317 cactggacttgtcaccttcagtgatccaagctatggcaaa--tgccggtactcgcagcag 1374
            ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||
Sbjct: 361  cactggacttgtcaccttcagtgatccaagctatggcaaaatggccggtactcgcagcag 420

               
Query: 1375 tga 1377
            |||
Sbjct: 421  tga 423