Jatropha Genome Database

JcCA0020472.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0020472.10 - phase: 1 /pseudo/partial
         (1319 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524773|gb|FM895471.1|FM895471 FM895471 Jatropha curcas emb...   739   0.0  

>gi|268524773|gb|FM895471.1|FM895471 FM895471 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002395,
           mRNA sequence
          Length = 581

 Score =  739 bits (373), Expect = 0.0
 Identities = 373/373 (100%)
 Strand = Plus / Plus

                                                                       
Query: 69  agctgcctgacagttcatgttctaggaagaaacctcacgtccggaactgtgctccgtggt 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 agctgcctgacagttcatgttctaggaagaaacctcacgtccggaactgtgctccgtggt 268

                                                                       
Query: 129 tctatgcatctggttgatttagcaggaagtgaacgagtcgacaaatcagaggtcactgga 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tctatgcatctggttgatttagcaggaagtgaacgagtcgacaaatcagaggtcactgga 328

                                                                       
Query: 189 gatagattaaaggaagcacagcatatcaacaaatctctttctgctttaggagatgtgatt 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gatagattaaaggaagcacagcatatcaacaaatctctttctgctttaggagatgtgatt 388

                                                                       
Query: 249 tcttctcttgctcagaaaagttctcatgttccatatagaaacagtaaactcacacaacta 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tcttctcttgctcagaaaagttctcatgttccatatagaaacagtaaactcacacaacta 448

                                                                       
Query: 309 ctccaagattcacttggagggcaagcaaagacacttatgtttgtccacataagtcctgag 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ctccaagattcacttggagggcaagcaaagacacttatgtttgtccacataagtcctgag 508

                                                                       
Query: 369 catgaagctcttggagaaacgcttagcacactaaaatttgctgaacgggtcgccacagtt 428
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 catgaagctcttggagaaacgcttagcacactaaaatttgctgaacgggtcgccacagtt 568

                        
Query: 429 gagcttggtgctg 441
           |||||||||||||
Sbjct: 569 gagcttggtgctg 581