Jatropha Genome Database

JcCA0013701.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0013701.10 + phase: 0 /pseudo/partial
         (822 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268519242|gb|FM887709.1|FM887709 FM887709 Jatropha curcas emb...   369   e-102

>gi|268519242|gb|FM887709.1|FM887709 FM887709 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000960,
           mRNA sequence
          Length = 388

 Score =  369 bits (186), Expect = e-102
 Identities = 186/186 (100%)
 Strand = Plus / Plus

                                                                       
Query: 529 gctttgaaatatatgctttagttccagggcttcttcgtgaggaggtgcatgttcaatctg 588
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gctttgaaatatatgctttagttccagggcttcttcgtgaggaggtgcatgttcaatctg 262

                                                                       
Query: 589 atccagcaggacgcttgattatatcgggtcaaccagagcaactggataatccttggggtg 648
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atccagcaggacgcttgattatatcgggtcaaccagagcaactggataatccttggggtg 322

                                                                       
Query: 649 tcacaccatttaaaaaggttgtcagtttaccttcacgaattgatccacatcagacatctg 708
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcacaccatttaaaaaggttgtcagtttaccttcacgaattgatccacatcagacatctg 382

                 
Query: 709 ctgtgg 714
           ||||||
Sbjct: 383 ctgtgg 388