Jatropha Genome Database
- JcCA0012011.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0012011.20 + phase: 0 /TE/partial
(4272 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268520781|gb|FM889539.1|FM889539 FM889539 Jatropha curcas emb... 813 0.0
>gi|268520781|gb|FM889539.1|FM889539 FM889539 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003223,
mRNA sequence
Length = 614
Score = 813 bits (410), Expect = 0.0
Identities = 563/614 (91%)
Strand = Plus / Minus
Query: 2660 acaaaggtagaaaaccaaatattggttactttcatatttttgggtgtaaatgctttattc 2719
|||||| |||||||||||||||| |||| ||||||||||| ||||||||||| |||||||
Sbjct: 614 acaaagttagaaaaccaaatattagttattttcatattttggggtgtaaatgttttattc 555
Query: 2720 tagataacaagaaaaatcatcttgctaaatttgacgctaaatcttatgaaggaatttttc 2779
||||||| |||||| ||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 554 tagataataagaaacatcatcttgctaaatttgatgctaaatcttataaaggaatttttc 495
Query: 2780 taggatattctagtaatagtaaagcatataaggtgtttaataagaaaactctagctgtag 2839
||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 494 taggatattttagtaatagtaaagcatatagagtgtttaataagaaaactctagttgtag 435
Query: 2840 aagaatctattcatgttgtgtttgatgaatctgactctacttctagaactttagaaaatg 2899
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 434 aagaatctattcatgttatgtttgatgaatctgactctacttctagaagtttagaaaatg 375
Query: 2900 atgatgttgtagattctaatcaagaaaagcagaacgaacaatcagagcaactagaacagc 2959
||||||||||||||||||||||||||||| |||| ||||||| | | ||||||||||| |
Sbjct: 374 atgatgttgtagattctaatcaagaaaagtagaatgaacaattaaaacaactagaacaac 315
Query: 2960 cagaaagtgagcaaaatgttgataatcaggctgaaccagaagatgaacatgaagattaga 3019
||||| |||||| |||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 314 tagaaaatgagcagaatgttgataatcaggctaaaccaaaagatgaacatgaagatcaga 255
Query: 3020 acacaactgaaagtcaaatgccagaaacagaaaatggagattctcaattaccaaaagcgt 3079
| ||||||||||||||||||||||||||||||||| | || |||||||||||||| |
Sbjct: 254 atgcaactgaaagtcaaatgccagaaacagaaaatgaaaatcttcaattaccaaaagaat 195
Query: 3080 ggcgatttcataagtatcatccacaagaggacattatggataatccttcagaaaggatga 3139
|||||| |||| ||||||||| ||||||||||| ||||||||||||||| |||||||||
Sbjct: 194 agcgattccataggtatcatcctcaagaggacatcatggataatccttcaaaaaggatga 135
Query: 3140 tgactagagctcaatataagagatattttggtaatgttgctttcgcttctcaaatagaac 3199
||||||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||
Sbjct: 134 tgactagagctcaatttaagagatattttggtaatgttgctgtcatttctcaattagaac 75
Query: 3200 ctaaaaatttagaagatgctcaaaatgatgaaagttcgattctagcaatgcaagaagagc 3259
|||||||||| ||||||||||||||||||||||||| |||||| || ||||||||||| |
Sbjct: 74 ctaaaaatttggaagatgctcaaaatgatgaaagttggattcttgctatgcaagaagaac 15
Query: 3260 taaatcaatttgag 3273
||||||||||||||
Sbjct: 14 taaatcaatttgag 1