Jatropha Genome Database

JcCA0009731.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0009731.30 - phase: 0 
         (423 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524822|gb|FM895520.1|FM895520 FM895520 Jatropha curcas emb...   815   0.0  

>gi|268524822|gb|FM895520.1|FM895520 FM895520 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002456,
           mRNA sequence
          Length = 520

 Score =  815 bits (411), Expect = 0.0
 Identities = 420/423 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttcgttttggtcattcttgacaatgtttattattttcatggcatattttgcttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  atggcttcgttttggtcattcttgacaatgtttattattttcatggcatattttgcttca 122

                                                                       
Query: 61  ctagcttttacaagtcatgtagtacatgtacaattttctactatatcagcagcaccagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ctagcttttacaagtcatgtagtacatgtacaattttctactatatcagcagcaccagca 182

                                                                       
Query: 121 tttttacctgaagctcctctttcttccccaccaacttcaagtttgtcaccagacattgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tttttacctgaagctcctctttcttccccaccaacttcaagtttgtcaccagacattgag 242

                                                                       
Query: 181 cctgttttccctacaacgggagtggcagtgccttctccagctgaatcatcactacccact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cctgttttccctacaacgggagtggcagtgccttctccagctgaatcatcactacccact 302

                                                                       
Query: 241 attccttcaagcccaagccctccaaatccagatgttattcatccagcgccaggtccttca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 attccttcaagcccaagccctccaaatccagatgttattcatccagcgccaggtccttca 362

                                                                       
Query: 301 atggcattttcgccgtctgggtctttaccagcttcttctgctacttctgtaaaccaagct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atggcattttcgccgtctgggtctttaccagcttcttctgctacttctgtaaaccaagct 422

                                                                       
Query: 361 gctgtttattttcttggtttgctgttggtggtgttttctttgatgcagctttctgctttt 420
           |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||
Sbjct: 423 gctgtttattttcttggtatgctgtaggtggtgtttactttgatgcagctttctgctttt 482

              
Query: 421 taa 423
           |||
Sbjct: 483 taa 485