Jatropha Genome Database

JcCA0009632.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0009632.10 + phase: 2 /partial
         (397 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091329|gb|GT228756.1|GT228756 JC321 Jatropha seeds from fr...   654   0.0  

>gi|262091329|gb|GT228756.1|GT228756 JC321 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL06SE.G07.scf 5', mRNA sequence
          Length = 563

 Score =  654 bits (330), Expect = 0.0
 Identities = 333/334 (99%)
 Strand = Plus / Plus

                                                                       
Query: 64  ggccaaaaatatggctcgtggtgctatgttactgctaaggagcgctaatggagctagggc 123
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 54  ggccaaaaatatggctcgtggtgctatgttactgcttaggagcgctaatggagctagggc 113

                                                                       
Query: 124 ttttctttatcctgttgttgatccttgtgatcttcaaggtttcgaggttctttctgtgtt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ttttctttatcctgttgttgatccttgtgatcttcaaggtttcgaggttctttctgtgtt 173

                                                                       
Query: 184 tcatccaactgatgaagttataaattctgttattatcgctcgtaaacttgattatggcta 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tcatccaactgatgaagttataaattctgttattatcgctcgtaaacttgattatggcta 233

                                                                       
Query: 244 taatgaccaccaaataaagcctctccatgatcttcaacaacaaggtcttgtttccaattt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 taatgaccaccaaataaagcctctccatgatcttcaacaacaaggtcttgtttccaattt 293

                                                                       
Query: 304 aatattgcctacgaaatgctctgagatcgaagcttttaatccacttaaccatggaaatat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aatattgcctacgaaatgctctgagatcgaagcttttaatccacttaaccatggaaatat 353

                                             
Query: 364 ggttgaagaattgactattgaggagaaactctct 397
           ||||||||||||||||||||||||||||||||||
Sbjct: 354 ggttgaagaattgactattgaggagaaactctct 387