Jatropha Genome Database

JcCA0009532.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0009532.10 - phase: 0 
         (1290 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268519053|gb|FM887520.1|FM887520 FM887520 Jatropha curcas emb...   391   e-108

>gi|268519053|gb|FM887520.1|FM887520 FM887520 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000740,
           mRNA sequence
          Length = 595

 Score =  391 bits (197), Expect = e-108
 Identities = 197/197 (100%)
 Strand = Plus / Minus

                                                                       
Query: 134 cagttcctggatgtgaagagcgaagtccagagccaaagccaagatggaacccaaaacctg 193
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 cagttcctggatgtgaagagcgaagtccagagccaaagccaagatggaacccaaaacctg 138

                                                                       
Query: 194 agcaaattcgcatactggaagcaattttcaattctggaatggtaaatccaccaagagatg 253
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 agcaaattcgcatactggaagcaattttcaattctggaatggtaaatccaccaagagatg 78

                                                                       
Query: 254 agataagaaggattagagctcaattacaagagtatggtcaagttggcgacgcaaatgtct 313
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77  agataagaaggattagagctcaattacaagagtatggtcaagttggcgacgcaaatgtct 18

                            
Query: 314 tttattggttccaaaac 330
           |||||||||||||||||
Sbjct: 17  tttattggttccaaaac 1



 Score =  270 bits (136), Expect = 4e-72
 Identities = 136/136 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggcttcgtcaaacagacactggcctagcatgttcaagtctaagccttgcacctcccac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atggcttcgtcaaacagacactggcctagcatgttcaagtctaagccttgcacctcccac 398

                                                                       
Query: 61  caccatcaatggcagcacgaaattaactcctcatctcttgtatcatctggttgccacaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 caccatcaatggcagcacgaaattaactcctcatctcttgtatcatctggttgccacaaa 338

                           
Query: 121 tcaccttatacttcag 136
           ||||||||||||||||
Sbjct: 337 tcaccttatacttcag 322