Jatropha Genome Database
- JcCA0008021.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0008021.30 - phase: 0
(474 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|262090508|gb|GT228866.1|GT228866 JC431 Jatropha seeds from fr... 940 0.0
gi|268522485|gb|FM894630.1|FM894630 FM894630 Jatropha curcas emb... 418 e-117
>gi|262090508|gb|GT228866.1|GT228866 JC431 Jatropha seeds from
fruits at three stages of maturation Jatropha curcas
cDNA clone PL09SE.A05.scf 5', mRNA sequence
Length = 702
Score = 940 bits (474), Expect = 0.0
Identities = 474/474 (100%)
Strand = Plus / Plus
Query: 1 atggcagcggcagcgccccaccacccgcgccaaagaccgccgctgccaccgcagactaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 atggcagcggcagcgccccaccacccgcgccaaagaccgccgctgccaccgcagactaga 173
Query: 61 cccgtccctcctccgagtagggcccaccctctcagtcgttggcccggcctggaaccaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 cccgtccctcctccgagtagggcccaccctctcagtcgttggcccggcctggaaccaatc 233
Query: 121 gatcgcgaaaagacttgccctttattgcttcgagttttcacaaagattggaagtcaccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gatcgcgaaaagacttgccctttattgcttcgagttttcacaaagattggaagtcaccac 293
Query: 181 aagatggaagactttgcagttggaggcaaagaacccaaggatgaggttcaaatatatacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aagatggaagactttgcagttggaggcaaagaacccaaggatgaggttcaaatatatacg 353
Query: 241 tggaaagatgcaactcttcacgaactaactgaccttgtcaaagaggtggttcccgaggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tggaaagatgcaactcttcacgaactaactgaccttgtcaaagaggtggttcccgaggca 413
Query: 301 aggaggcaaagtgcaagactgtcatttgcttttgtatatcctgatatacatggtcgtttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aggaggcaaagtgcaagactgtcatttgcttttgtatatcctgatatacatggtcgtttt 473
Query: 361 atgttgagagtggtgggagtgacacattcaaatgcaagacggccatatgatgccaaggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 atgttgagagtggtgggagtgacacattcaaatgcaagacggccatatgatgccaaggca 533
Query: 421 ttgggtgaactcagcttccagattggagattacttagatgtggcaatcctgtaa 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttgggtgaactcagcttccagattggagattacttagatgtggcaatcctgtaa 587
>gi|268522485|gb|FM894630.1|FM894630 FM894630 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000437,
mRNA sequence
Length = 528
Score = 418 bits (211), Expect = e-117
Identities = 218/219 (99%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 256 cttcacgaactaactgaccttgtcaaagaggtggttcccgaggcaaggaggcaaagtgca 315
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 5 cttcacgaactaactgacct-gtcaaagaggtggttcccgaggcaaggaggcaaagtgca 63
Query: 316 agactgtcatttgcttttgtatatcctgatatacatggtcgttttatgttgagagtggtg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 agactgtcatttgcttttgtatatcctgatatacatggtcgttttatgttgagagtggtg 123
Query: 376 ggagtgacacattcaaatgcaagacggccatatgatgccaaggcattgggtgaactcagc 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ggagtgacacattcaaatgcaagacggccatatgatgccaaggcattgggtgaactcagc 183
Query: 436 ttccagattggagattacttagatgtggcaatcctgtaa 474
|||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ttccagattggagattacttagatgtggcaatcctgtaa 222