Jatropha Genome Database

JcCA0007981.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0007981.10 - phase: 0 
         (777 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268517077|gb|FM892629.1|FM892629 FM892629 Jatropha curcas emb...    72   1e-12

>gi|268517077|gb|FM892629.1|FM892629 FM892629 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003234,
           mRNA sequence
          Length = 539

 Score = 71.9 bits (36), Expect = 1e-12
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 376 cattctcaacatcatcggcttgttgtcccatatgcatttggggctctatacaatcatcca 435
           ||||| ||||||||| |||| ||||||||||||||| ||||||| || || ||||| |||
Sbjct: 42  cattcacaacatcataggctagttgtcccatatgcaattggggcactttataatcaccca 101

                                   
Query: 436 ctagaggggcttctgcttgacaca 459
           || ||||| ||  |||||||||||
Sbjct: 102 ctggagggtctattgcttgacaca 125