Jatropha Genome Database

JcCA0004811.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0004811.10 + phase: 2 /partial
         (2731 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525103|gb|FM895745.1|FM895745 FM895745 Jatropha curcas emb...   484   e-136

>gi|268525103|gb|FM895745.1|FM895745 FM895745 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002723,
            mRNA sequence
          Length = 547

 Score =  484 bits (244), Expect = e-136
 Identities = 244/244 (100%)
 Strand = Plus / Minus

                                                                        
Query: 2488 gatgaaccagggcccaagtaatttccttaaatcactaatgagccatggcgcacggcagcc 2547
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547  gatgaaccagggcccaagtaatttccttaaatcactaatgagccatggcgcacggcagcc 488

                                                                        
Query: 2548 tgctcctggttatcatatagccaaattacctgcattcaaggggaagtcaaatggaaatga 2607
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487  tgctcctggttatcatatagccaaattacctgcattcaaggggaagtcaaatggaaatga 428

                                                                        
Query: 2608 atcatcaagctatgatcaaagacctccattgcatgctcctacttcagttgggtacaattt 2667
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427  atcatcaagctatgatcaaagacctccattgcatgctcctacttcagttgggtacaattt 368

                                                                        
Query: 2668 ggatagccacggttcaagatcaaggtgggctaagcgacagcgtgctaaagcatccaagaa 2727
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367  ggatagccacggttcaagatcaaggtgggctaagcgacagcgtgctaaagcatccaagaa 308

                
Query: 2728 gcaa 2731
            ||||
Sbjct: 307  gcaa 304