Jatropha Genome Database

JcSR479173f.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcSR479173f.10 + phase: 0 /partial
         (64 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g04430.1                                                       107   2e-24
Glyma15g15480.1                                                       107   2e-24
Glyma17g03430.1                                                       107   4e-24
Glyma07g37180.1                                                       105   9e-24
Glyma03g39210.1                                                       100   4e-22
Glyma19g41770.1                                                       100   6e-22
Glyma10g29000.1                                                        99   9e-22
Glyma20g38320.2                                                        99   9e-22
Glyma20g38320.1                                                        99   9e-22
Glyma20g38320.3                                                        99   1e-21
Glyma18g38920.1                                                        66   7e-12
Glyma18g38950.1                                                        65   1e-11
Glyma18g39200.1                                                        65   2e-11
Glyma18g39160.1                                                        65   2e-11
Glyma0168s00200.1                                                      62   2e-10
Glyma19g41490.1                                                        61   3e-10
Glyma18g15130.1                                                        55   2e-08
Glyma03g39000.1                                                        52   1e-07

>Glyma09g04430.1 
          Length = 531

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 50/62 (80%), Positives = 55/62 (88%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LESLP MVAGVWS++ + QLEATT FRKLLSIERSPPI EV+QAGVVPRF+EFL R DFP
Sbjct: 73  LESLPAMVAGVWSDDNSQQLEATTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLVREDFP 132

Query: 61  QL 62
           QL
Sbjct: 133 QL 134


>Glyma15g15480.1 
          Length = 531

 Score =  107 bits (268), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 50/62 (80%), Positives = 55/62 (88%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LESLP MVAGVWS++ + QLEATT FRKLLSIERSPPI EV+QAGVVPRF+EFL R DFP
Sbjct: 73  LESLPAMVAGVWSDDNSQQLEATTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLVREDFP 132

Query: 61  QL 62
           QL
Sbjct: 133 QL 134


>Glyma17g03430.1 
          Length = 530

 Score =  107 bits (266), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 50/62 (80%), Positives = 55/62 (88%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LESLP MVAGVWS++ + QLEATT FRKLLSIERSPPI EV+QAGVVPRF+EFL R DFP
Sbjct: 72  LESLPAMVAGVWSDDNSIQLEATTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLVREDFP 131

Query: 61  QL 62
           QL
Sbjct: 132 QL 133


>Glyma07g37180.1 
          Length = 520

 Score =  105 bits (263), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 50/62 (80%), Positives = 54/62 (87%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LESLP MVAGVWS + + QLEATT FRKLLSIERSPPI EV+QAGVVPRF+EFL R DFP
Sbjct: 62  LESLPAMVAGVWSNDNSLQLEATTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLVREDFP 121

Query: 61  QL 62
           QL
Sbjct: 122 QL 123


>Glyma03g39210.1 
          Length = 532

 Score =  100 bits (248), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 53/62 (85%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LE LP MV GV++++ N QLEATT FRKLLSIERSPPI EV+QAGVVPRF++FL R DFP
Sbjct: 73  LEHLPAMVTGVFTDDNNMQLEATTQFRKLLSIERSPPIEEVIQAGVVPRFVDFLMREDFP 132

Query: 61  QL 62
           QL
Sbjct: 133 QL 134


>Glyma19g41770.1 
          Length = 532

 Score = 99.8 bits (247), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 52/62 (83%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LE LP MV GV++++ N Q EATT FRKLLSIERSPPI EV+QAGVVPRF+EFL R DFP
Sbjct: 73  LEHLPAMVTGVFTDDNNMQFEATTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLMREDFP 132

Query: 61  QL 62
           QL
Sbjct: 133 QL 134


>Glyma10g29000.1 
          Length = 532

 Score = 99.4 bits (246), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 51/62 (82%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LE LP MV GVW+++ N QLEATT FRKLLSIERSPPI EV+Q GVV RF+EFL R DFP
Sbjct: 73  LEHLPSMVTGVWTDDNNLQLEATTQFRKLLSIERSPPIEEVIQTGVVSRFVEFLMREDFP 132

Query: 61  QL 62
           QL
Sbjct: 133 QL 134


>Glyma20g38320.2 
          Length = 532

 Score = 99.0 bits (245), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 51/62 (82%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LE LP MV GVW+++ N QLEATT FRKLLSIERSPPI EV+Q GVV RF+EFL R DFP
Sbjct: 73  LEHLPSMVTGVWTDDNNLQLEATTQFRKLLSIERSPPIEEVIQTGVVSRFVEFLMREDFP 132

Query: 61  QL 62
           QL
Sbjct: 133 QL 134


>Glyma20g38320.1 
          Length = 532

 Score = 99.0 bits (245), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 51/62 (82%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LE LP MV GVW+++ N QLEATT FRKLLSIERSPPI EV+Q GVV RF+EFL R DFP
Sbjct: 73  LEHLPSMVTGVWTDDNNLQLEATTQFRKLLSIERSPPIEEVIQTGVVSRFVEFLMREDFP 132

Query: 61  QL 62
           QL
Sbjct: 133 QL 134


>Glyma20g38320.3 
          Length = 413

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 51/62 (82%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LE LP MV GVW+++ N QLEATT FRKLLSIERSPPI EV+Q GVV RF+EFL R DFP
Sbjct: 73  LEHLPSMVTGVWTDDNNLQLEATTQFRKLLSIERSPPIEEVIQTGVVSRFVEFLMREDFP 132

Query: 61  QL 62
           QL
Sbjct: 133 QL 134


>Glyma18g38920.1 
          Length = 491

 Score = 66.2 bits (160), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 1/62 (1%)

Query: 1  LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
          LE++PVM   +WSE    Q E T HFRKLL+    PPI+EV++A VVPR +EFL  +   
Sbjct: 34 LEAIPVMKQRLWSESAAEQFEGTIHFRKLLA-NGHPPIDEVIKADVVPRIVEFLESDGLH 92

Query: 61 QL 62
          QL
Sbjct: 93 QL 94


>Glyma18g38950.1 
          Length = 541

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LE +PVM   +WSE    Q E T HFRKLL+    PPI+EV++A VVPR +EFL  +   
Sbjct: 46  LEDIPVMKQRLWSESAAEQFEGTIHFRKLLA-NGHPPIDEVIKADVVPRIVEFLESDGLH 104

Query: 61  QL 62
           QL
Sbjct: 105 QL 106


>Glyma18g39200.1 
          Length = 470

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LE +PVM   +WSE    Q E T HFRKLL+    PPI+EV++A VVPR +EFL  +   
Sbjct: 46  LEDIPVMKQRLWSESAAEQFEGTIHFRKLLA-NGHPPIDEVIKADVVPRIVEFLESDGLH 104

Query: 61  QL 62
           QL
Sbjct: 105 QL 106


>Glyma18g39160.1 
          Length = 470

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARNDFP 60
           LE +PVM   +WSE    Q E T HFRKLL+    PPI+EV++A VVPR +EFL  +   
Sbjct: 46  LEDIPVMKQRLWSESAAEQFEGTIHFRKLLA-NGHPPIDEVIKADVVPRIVEFLESDGLH 104

Query: 61  QL 62
           QL
Sbjct: 105 QL 106


>Glyma0168s00200.1 
          Length = 58

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 1  LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIERSPPINEVVQAGVVPRFIEFLARN 57
          LE +PVM   +WSE    Q E T HFRKLL+    PPI+EV++A VVPR +EFL  +
Sbjct: 2  LEDIPVMKQRLWSESAAEQFEGTIHFRKLLA-NGHPPIDEVIKADVVPRIVEFLESD 57


>Glyma19g41490.1 
          Length = 555

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 47/63 (74%), Gaps = 1/63 (1%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLS-IERSPPINEVVQAGVVPRFIEFLARNDF 59
           LE++PVM+  + S+  +SQLE T+H   LL+ +++ PPI++++  G++P F+E L+R+D 
Sbjct: 58  LEAIPVMLQRLCSQYPDSQLEITSHLNTLLALVDQRPPIDKILTEGILPLFVELLSRHDA 117

Query: 60  PQL 62
           PQL
Sbjct: 118 PQL 120


>Glyma18g15130.1 
          Length = 427

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)

Query: 4   LPVMVAGVWSEEQNSQLEATTHFRKLL-SIERSPPINEVVQAGVVPRFIEFLARNDFPQL 62
           L +M   +WSE  + Q++A  HF  LL SIE   PI+EV++A VVPRF++FL   D P L
Sbjct: 75  LNLMKQRIWSECPDEQMDAMMHFTNLLGSIEPPRPIDEVIEAEVVPRFVQFLDMYDKPDL 134


>Glyma03g39000.1 
          Length = 527

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 1   LESLPVMVAGVWSEEQNSQLEATTHFRKLLSIE-RSPPINEVVQAGVVPRFIEFLARNDF 59
           LE++  MV  + SE   ++LE T H   L S+  + P I++V++ G+VPRF  FL+R+D 
Sbjct: 66  LEAISAMVDHICSEFPPAELEKTRHAEILSSLAAQCPSIDDVIEQGIVPRFATFLSRDDA 125

Query: 60  PQL 62
           PQL
Sbjct: 126 PQL 128