Jatropha Genome Database

JcPR14IO7F0.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR14IO7F0.10 + phase: 2 /pseudo/partial/short
         (39 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g39770.1                                                        55   1e-08
Glyma12g22240.1                                                        55   2e-08

>Glyma06g39770.1 
          Length = 789

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/31 (77%), Positives = 27/31 (87%)

Query: 1   YYMNQSLKTAFEMAPADPTVDLNMQL*VILH 31
           YY+NQSLK AFEM+PADPTVDLNMQL  + H
Sbjct: 336 YYLNQSLKKAFEMSPADPTVDLNMQLTKLAH 366


>Glyma12g22240.1 
          Length = 793

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/31 (77%), Positives = 27/31 (87%)

Query: 1   YYMNQSLKTAFEMAPADPTVDLNMQL*VILH 31
           YY+NQSLK AFEM+PADPTVDLNMQL  + H
Sbjct: 341 YYLNQSLKKAFEMSPADPTVDLNMQLTKLAH 371