Jatropha Genome Database

JcPR13H21R2.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR13H21R2.10 + phase: 2 /pseudo/partial
         (108 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g12660.1                                                       104   3e-23
Glyma03g24280.3                                                       104   3e-23
Glyma03g24280.2                                                       104   3e-23
Glyma03g24280.1                                                       104   3e-23
Glyma07g12660.2                                                       103   3e-23
Glyma17g16400.4                                                        95   1e-20
Glyma17g16400.3                                                        95   1e-20
Glyma17g16400.2                                                        95   1e-20
Glyma17g16400.1                                                        95   1e-20
Glyma05g06110.1                                                        95   1e-20

>Glyma07g12660.1 
          Length = 402

 Score =  104 bits (259), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/49 (95%), Positives = 48/49 (97%)

Query: 49  QTQGRESIAAKLVANLITEAGVNRVLACDLHSGQSMGYFDIPVDHVYGQ 97
           +TQGRESIAAKLVANLITEAG NRVLACDLHSGQSMGYFDIPVDHVYGQ
Sbjct: 182 KTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQ 230


>Glyma03g24280.3 
          Length = 397

 Score =  104 bits (259), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/49 (95%), Positives = 48/49 (97%)

Query: 49  QTQGRESIAAKLVANLITEAGVNRVLACDLHSGQSMGYFDIPVDHVYGQ 97
           +TQGRESIAAKLVANLITEAG NRVLACDLHSGQSMGYFDIPVDHVYGQ
Sbjct: 184 KTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQ 232


>Glyma03g24280.2 
          Length = 398

 Score =  104 bits (259), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/49 (95%), Positives = 48/49 (97%)

Query: 49  QTQGRESIAAKLVANLITEAGVNRVLACDLHSGQSMGYFDIPVDHVYGQ 97
           +TQGRESIAAKLVANLITEAG NRVLACDLHSGQSMGYFDIPVDHVYGQ
Sbjct: 184 KTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQ 232


>Glyma03g24280.1 
          Length = 404

 Score =  104 bits (259), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/49 (95%), Positives = 48/49 (97%)

Query: 49  QTQGRESIAAKLVANLITEAGVNRVLACDLHSGQSMGYFDIPVDHVYGQ 97
           +TQGRESIAAKLVANLITEAG NRVLACDLHSGQSMGYFDIPVDHVYGQ
Sbjct: 184 KTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQ 232


>Glyma07g12660.2 
          Length = 396

 Score =  103 bits (258), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/49 (95%), Positives = 48/49 (97%)

Query: 49  QTQGRESIAAKLVANLITEAGVNRVLACDLHSGQSMGYFDIPVDHVYGQ 97
           +TQGRESIAAKLVANLITEAG NRVLACDLHSGQSMGYFDIPVDHVYGQ
Sbjct: 182 KTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQ 230


>Glyma17g16400.4 
          Length = 337

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/49 (87%), Positives = 47/49 (95%)

Query: 49  QTQGRESIAAKLVANLITEAGVNRVLACDLHSGQSMGYFDIPVDHVYGQ 97
           +TQGRESIAAKLVANLIT+AG +RVLACDLHSGQSMGYFDIPVDHV+ Q
Sbjct: 192 KTQGRESIAAKLVANLITKAGADRVLACDLHSGQSMGYFDIPVDHVHCQ 240


>Glyma17g16400.3 
          Length = 405

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/49 (87%), Positives = 47/49 (95%)

Query: 49  QTQGRESIAAKLVANLITEAGVNRVLACDLHSGQSMGYFDIPVDHVYGQ 97
           +TQGRESIAAKLVANLIT+AG +RVLACDLHSGQSMGYFDIPVDHV+ Q
Sbjct: 191 KTQGRESIAAKLVANLITKAGADRVLACDLHSGQSMGYFDIPVDHVHCQ 239


>Glyma17g16400.2 
          Length = 352

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/49 (87%), Positives = 47/49 (95%)

Query: 49  QTQGRESIAAKLVANLITEAGVNRVLACDLHSGQSMGYFDIPVDHVYGQ 97
           +TQGRESIAAKLVANLIT+AG +RVLACDLHSGQSMGYFDIPVDHV+ Q
Sbjct: 138 KTQGRESIAAKLVANLITKAGADRVLACDLHSGQSMGYFDIPVDHVHCQ 186


>Glyma17g16400.1 
          Length = 406

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/49 (87%), Positives = 47/49 (95%)

Query: 49  QTQGRESIAAKLVANLITEAGVNRVLACDLHSGQSMGYFDIPVDHVYGQ 97
           +TQGRESIAAKLVANLIT+AG +RVLACDLHSGQSMGYFDIPVDHV+ Q
Sbjct: 192 KTQGRESIAAKLVANLITKAGADRVLACDLHSGQSMGYFDIPVDHVHCQ 240


>Glyma05g06110.1 
          Length = 393

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/49 (87%), Positives = 47/49 (95%)

Query: 49  QTQGRESIAAKLVANLITEAGVNRVLACDLHSGQSMGYFDIPVDHVYGQ 97
           +TQGRESIAAKLVANLIT+AG +RVLACDLHSGQSMGYFDIPVDHV+ Q
Sbjct: 179 KTQGRESIAAKLVANLITKAGADRVLACDLHSGQSMGYFDIPVDHVHCQ 227