Jatropha Genome Database

JcPR04JCLS5.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR04JCLS5.10 + phase: 1 /pseudo/partial
         (124 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g40520.1                                                       152   8e-38
Glyma14g40520.2                                                       152   8e-38
Glyma17g37640.1                                                       150   2e-37
Glyma06g02800.1                                                       140   3e-34
Glyma04g02770.1                                                       138   2e-33

>Glyma14g40520.1 
          Length = 1071

 Score =  152 bits (384), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 75/114 (65%), Positives = 89/114 (78%), Gaps = 1/114 (0%)

Query: 1   EINSPDCIDKVALPENKVLQRDCSGERYQNGCAHISSPTSNPEVPDDGNLVSGYGSNTTL 60
           E NSPDCIDK+ALPENK++Q + SGERYQNG +HI +P S+PEVPDDGNL  GY SN T 
Sbjct: 736 ETNSPDCIDKIALPENKLVQDNSSGERYQNGHSHILNPCSDPEVPDDGNLAPGYESNATS 795

Query: 61  CKVSLEEFEELKTEKDNMAMDLARCTENLEMTKSQLHETEQLLARSLKLQLTSA 114
            K S+E+FEELK EK+    DL++C ENLEMTKS+L ETEQ LA  +K QL SA
Sbjct: 796 QKFSMEDFEELKLEKEKAVADLSKCAENLEMTKSRLLETEQYLAE-VKSQLASA 848


>Glyma14g40520.2 
          Length = 996

 Score =  152 bits (384), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 75/114 (65%), Positives = 89/114 (78%), Gaps = 1/114 (0%)

Query: 1   EINSPDCIDKVALPENKVLQRDCSGERYQNGCAHISSPTSNPEVPDDGNLVSGYGSNTTL 60
           E NSPDCIDK+ALPENK++Q + SGERYQNG +HI +P S+PEVPDDGNL  GY SN T 
Sbjct: 661 ETNSPDCIDKIALPENKLVQDNSSGERYQNGHSHILNPCSDPEVPDDGNLAPGYESNATS 720

Query: 61  CKVSLEEFEELKTEKDNMAMDLARCTENLEMTKSQLHETEQLLARSLKLQLTSA 114
            K S+E+FEELK EK+    DL++C ENLEMTKS+L ETEQ LA  +K QL SA
Sbjct: 721 QKFSMEDFEELKLEKEKAVADLSKCAENLEMTKSRLLETEQYLAE-VKSQLASA 773


>Glyma17g37640.1 
          Length = 895

 Score =  150 bits (380), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 74/114 (64%), Positives = 90/114 (78%), Gaps = 1/114 (0%)

Query: 1   EINSPDCIDKVALPENKVLQRDCSGERYQNGCAHISSPTSNPEVPDDGNLVSGYGSNTTL 60
           E NSPDCIDK+ALPENK++Q + SGER+QNG +HI +P S+PE+PDDGNL  GY SN T 
Sbjct: 560 ETNSPDCIDKIALPENKLVQDNSSGERFQNGRSHILNPCSDPEIPDDGNLAPGYESNATS 619

Query: 61  CKVSLEEFEELKTEKDNMAMDLARCTENLEMTKSQLHETEQLLARSLKLQLTSA 114
            K S+E FEELK EK+   +DL++C ENLEMTKS+L ETEQ LA  +K QLTSA
Sbjct: 620 QKFSMENFEELKLEKEKAVVDLSKCVENLEMTKSRLLETEQHLAE-VKSQLTSA 672


>Glyma06g02800.1 
          Length = 1028

 Score =  140 bits (354), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/114 (69%), Positives = 94/114 (82%), Gaps = 1/114 (0%)

Query: 1   EINSPDCIDKVALPENKVLQRDCSGERYQNGCAHISSPTSNPEVPDDGNLVSGYGSNTTL 60
           E NSPDCIDK+ALPENK++Q + SGERYQNGC+HI +P SNPEVPDDGNLVSGY ++   
Sbjct: 681 ESNSPDCIDKIALPENKLVQDNSSGERYQNGCSHILNPCSNPEVPDDGNLVSGYKADAAS 740

Query: 61  CKVSLEEFEELKTEKDNMAMDLARCTENLEMTKSQLHETEQLLARSLKLQLTSA 114
            K+S+EEFEELK EK+ + +DL+ CTENLEMTKSQL E EQLLA  +K QL SA
Sbjct: 741 QKLSIEEFEELKLEKEKVVIDLSNCTENLEMTKSQLLEAEQLLAE-VKSQLASA 793


>Glyma04g02770.1 
          Length = 1030

 Score =  138 bits (347), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 96/118 (81%), Gaps = 1/118 (0%)

Query: 1   EINSPDCIDKVALPENKVLQRDCSGERYQNGCAHISSPTSNPEVPDDGNLVSGYGSNTTL 60
           E +SPDCIDK+ALPENK++  + SGERYQNGC+HI +P SNPEVPDDGNLVSGY ++   
Sbjct: 684 ESSSPDCIDKIALPENKLVHDNSSGERYQNGCSHIINPCSNPEVPDDGNLVSGYKADAAS 743

Query: 61  CKVSLEEFEELKTEKDNMAMDLARCTENLEMTKSQLHETEQLLARSLKLQLTSATEVK 118
            K+S+EEFEELK EK+ + +DL+ CTENLEMTKSQL +TEQLLA  +K QL SA + K
Sbjct: 744 QKLSIEEFEELKLEKEKVVIDLSNCTENLEMTKSQLLDTEQLLAE-VKSQLASALKSK 800