Jatropha Genome Database

JcPR04F24VT.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR04F24VT.10 + phase: 0 /partial
         (80 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g03200.1                                                       113   5e-26
Glyma02g45610.1                                                       108   1e-24

>Glyma14g03200.1 
          Length = 453

 Score =  113 bits (282), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 54/59 (91%)

Query: 7   DGKHPACDKSYFGRREFSFTLDNDIYLRFQSFNNESELENSIKEKCPFKIDIGPVYSVD 65
           DGKHP CD+SY GRREFSFTL+NDIYLRFQSF+N  ELENSIKEKCP KIDIGPVY+VD
Sbjct: 63  DGKHPGCDQSYIGRREFSFTLENDIYLRFQSFHNAHELENSIKEKCPVKIDIGPVYTVD 121


>Glyma02g45610.1 
          Length = 434

 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 53/59 (89%)

Query: 7  DGKHPACDKSYFGRREFSFTLDNDIYLRFQSFNNESELENSIKEKCPFKIDIGPVYSVD 65
          DGKHP CD+SY GRREFSFTL+NDIYLRFQSF+N  ELENSIKEK P KIDIGPVY+VD
Sbjct: 36 DGKHPGCDQSYIGRREFSFTLENDIYLRFQSFHNALELENSIKEKTPVKIDIGPVYTVD 94