Jatropha Genome Database

JcPR03AIW3S.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR03AIW3S.10 - phase: 1 /partial
         (90 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g00990.1                                                        89   1e-18
Glyma04g00960.1                                                        78   3e-15

>Glyma06g00990.1 
          Length = 691

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 2   IVSHHSILIFEXXXXXXXXXXXXXXXXGFQYFVDGLTEDAISDYRNLTSAAMRGENDTCL 61
           IVSHHS+LIFE                  QY  + L+ED    YRNL+  A RGE +TCL
Sbjct: 394 IVSHHSVLIFEAVGTSSTTGGGASPALSAQYLAEELSED----YRNLSELAFRGEYETCL 449

Query: 62  LYADQLKQRCVDQFKEGSIGMEQLAAVD 89
           +Y +++K+RCV+QFK+G++ MEQLAAV+
Sbjct: 450 VYTEEMKERCVEQFKQGTVCMEQLAAVE 477


>Glyma04g00960.1 
          Length = 697

 Score = 77.8 bits (190), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 4/88 (4%)

Query: 2   IVSHHSILIFEXXXXXXXXXXXXXXXXGFQYFVDGLTEDAISDYRNLTSAAMRGENDTCL 61
           IVSHHS+LIFE                   Y  + L+ED    Y  L+  A RG+ +TCL
Sbjct: 396 IVSHHSVLIFEAVGTSSTNGGGAPPALSAHYLAEELSED----YGYLSELAFRGDYETCL 451

Query: 62  LYADQLKQRCVDQFKEGSIGMEQLAAVD 89
           +Y +++K+RCV+QFK+G++ MEQLAAV+
Sbjct: 452 VYTEEMKERCVEQFKQGTVCMEQLAAVE 479