Jatropha Genome Database

JcPR02IGLIS.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR02IGLIS.10 + phase: 0 /pseudo/partial
         (164 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g31440.1                                                        76   2e-14
Glyma19g34290.1                                                        72   2e-13
Glyma19g34290.2                                                        72   2e-13
Glyma06g07380.2                                                        59   3e-09
Glyma04g07300.1                                                        59   3e-09
Glyma04g07300.2                                                        59   3e-09
Glyma06g07380.3                                                        58   4e-09
Glyma06g07380.4                                                        58   4e-09
Glyma06g07380.1                                                        58   4e-09
Glyma14g14970.1                                                        58   5e-09
Glyma14g14970.2                                                        57   7e-09

>Glyma03g31440.1 
          Length = 668

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 11/81 (13%)

Query: 48  SRSPSRKSGELSQGRS-------QRSPPDNLVHKAPETSNSNHGRELSRSRSPNGTPQRV 100
            RSP+R SGEL+QGR+       ++SP      KA E     HG+  S+S SPN  P+R+
Sbjct: 420 GRSPTRDSGELNQGRALLLASPGKKSP----GQKASEPPAPKHGQGFSKSPSPNSMPKRI 475

Query: 101 RKGRGFTERYSFARRYRTPSP 121
           +KGRGFTERY+FARRYRTPSP
Sbjct: 476 KKGRGFTERYAFARRYRTPSP 496


>Glyma19g34290.1 
          Length = 659

 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 6/75 (8%)

Query: 49  RSPSRKSGELSQGRSQ--RSPPDNLVHKAPETSNSNHGRELSRSRSPNGTPQRVRKGRGF 106
           RSP+R S EL+QG +    SP      K  E +   HG+  S+S SPNG P+R++KGRGF
Sbjct: 420 RSPTRDSRELNQGHASLLASP----GQKVSEPAAPKHGQGFSKSPSPNGMPKRIKKGRGF 475

Query: 107 TERYSFARRYRTPSP 121
           TERY+FARRYRTPSP
Sbjct: 476 TERYAFARRYRTPSP 490


>Glyma19g34290.2 
          Length = 635

 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 6/75 (8%)

Query: 49  RSPSRKSGELSQGRSQ--RSPPDNLVHKAPETSNSNHGRELSRSRSPNGTPQRVRKGRGF 106
           RSP+R S EL+QG +    SP      K  E +   HG+  S+S SPNG P+R++KGRGF
Sbjct: 396 RSPTRDSRELNQGHASLLASP----GQKVSEPAAPKHGQGFSKSPSPNGMPKRIKKGRGF 451

Query: 107 TERYSFARRYRTPSP 121
           TERY+FARRYRTPSP
Sbjct: 452 TERYAFARRYRTPSP 466


>Glyma06g07380.2 
          Length = 805

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 34/37 (91%)

Query: 84  GRELSRSRSPNGTPQRVRKGRGFTERYSFARRYRTPS 120
           GR +SRS SP+ +P+R+R+GRGF+ERYS+ARRYRTPS
Sbjct: 620 GRSVSRSVSPDASPKRIRRGRGFSERYSYARRYRTPS 656


>Glyma04g07300.1 
          Length = 805

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 34/37 (91%)

Query: 84  GRELSRSRSPNGTPQRVRKGRGFTERYSFARRYRTPS 120
           GR +SRS SP+ +P+R+R+GRGF+ERYS+ARRYRTPS
Sbjct: 628 GRSVSRSVSPDASPKRIRRGRGFSERYSYARRYRTPS 664


>Glyma04g07300.2 
          Length = 719

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 34/37 (91%)

Query: 84  GRELSRSRSPNGTPQRVRKGRGFTERYSFARRYRTPS 120
           GR +SRS SP+ +P+R+R+GRGF+ERYS+ARRYRTPS
Sbjct: 666 GRSVSRSVSPDASPKRIRRGRGFSERYSYARRYRTPS 702


>Glyma06g07380.3 
          Length = 857

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 34/37 (91%)

Query: 84  GRELSRSRSPNGTPQRVRKGRGFTERYSFARRYRTPS 120
           GR +SRS SP+ +P+R+R+GRGF+ERYS+ARRYRTPS
Sbjct: 672 GRSVSRSVSPDASPKRIRRGRGFSERYSYARRYRTPS 708


>Glyma06g07380.4 
          Length = 770

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 34/37 (91%)

Query: 84  GRELSRSRSPNGTPQRVRKGRGFTERYSFARRYRTPS 120
           GR +SRS SP+ +P+R+R+GRGF+ERYS+ARRYRTPS
Sbjct: 685 GRSVSRSVSPDASPKRIRRGRGFSERYSYARRYRTPS 721


>Glyma06g07380.1 
          Length = 870

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/37 (70%), Positives = 34/37 (91%)

Query: 84  GRELSRSRSPNGTPQRVRKGRGFTERYSFARRYRTPS 120
           GR +SRS SP+ +P+R+R+GRGF+ERYS+ARRYRTPS
Sbjct: 685 GRSVSRSVSPDASPKRIRRGRGFSERYSYARRYRTPS 721


>Glyma14g14970.1 
          Length = 886

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/37 (72%), Positives = 33/37 (89%)

Query: 84  GRELSRSRSPNGTPQRVRKGRGFTERYSFARRYRTPS 120
           GR LSRS SP+ +P+R+R+GRGF ERYS+ARRYRTPS
Sbjct: 751 GRSLSRSVSPDVSPKRIRRGRGFNERYSYARRYRTPS 787


>Glyma14g14970.2 
          Length = 469

 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/37 (72%), Positives = 33/37 (89%)

Query: 84  GRELSRSRSPNGTPQRVRKGRGFTERYSFARRYRTPS 120
           GR LSRS SP+ +P+R+R+GRGF ERYS+ARRYRTPS
Sbjct: 304 GRSLSRSVSPDVSPKRIRRGRGFNERYSYARRYRTPS 340