Jatropha Genome Database

JcPR02I9SQ6.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR02I9SQ6.10 - phase: 2 /partial
         (118 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g02960.1                                                        67   6e-12
Glyma15g15830.1                                                        67   6e-12
Glyma07g37680.1                                                        64   5e-11
Glyma09g05000.1                                                        53   7e-08
Glyma15g39330.1                                                        52   1e-07

>Glyma17g02960.1 
          Length = 535

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/40 (75%), Positives = 32/40 (80%)

Query: 50  LQTSSCKFDLKEPYYRMSQPQVYGMAQDQQPHQMINAQVI 89
           LQTSSCK DLKEPYYRMSQPQ Y +AQDQQP  +I  Q I
Sbjct: 465 LQTSSCKLDLKEPYYRMSQPQAYALAQDQQPQPLIQTQDI 504


>Glyma15g15830.1 
          Length = 544

 Score = 66.6 bits (161), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/40 (70%), Positives = 30/40 (75%)

Query: 50  LQTSSCKFDLKEPYYRMSQPQVYGMAQDQQPHQMINAQVI 89
           LQTSSCK DLKEPYYRMSQPQ Y + QDQQP   +  Q I
Sbjct: 473 LQTSSCKLDLKEPYYRMSQPQAYPLTQDQQPQPFLQTQDI 512


>Glyma07g37680.1 
          Length = 535

 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 29/40 (72%), Positives = 31/40 (77%)

Query: 50  LQTSSCKFDLKEPYYRMSQPQVYGMAQDQQPHQMINAQVI 89
           LQTSSCK DLKEPYYRMSQPQ Y +AQDQQ   +I  Q I
Sbjct: 465 LQTSSCKLDLKEPYYRMSQPQAYALAQDQQSQPLIQTQDI 504


>Glyma09g05000.1 
          Length = 395

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/26 (84%), Positives = 23/26 (88%)

Query: 50  LQTSSCKFDLKEPYYRMSQPQVYGMA 75
           LQTSSCK DLKEPYYRMSQPQ Y +A
Sbjct: 324 LQTSSCKLDLKEPYYRMSQPQAYPLA 349


>Glyma15g39330.1 
          Length = 59

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/28 (82%), Positives = 24/28 (85%)

Query: 50 LQTSSCKFDLKEPYYRMSQPQVYGMAQD 77
          LQTSS K DLKEPYYRMSQPQ Y +AQD
Sbjct: 32 LQTSSYKLDLKEPYYRMSQPQAYALAQD 59