Jatropha Genome Database
- JcPR02GZLT5.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcPR02GZLT5.10 + phase: 0 /pseudo/partial
(74 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g28620.2 87 5e-18
Glyma13g28620.1 87 5e-18
Glyma15g10490.1 87 6e-18
Glyma02g17160.1 82 1e-16
Glyma07g38150.1 77 3e-15
Glyma17g02570.1 70 7e-13
Glyma17g02570.3 70 7e-13
Glyma17g02570.2 70 7e-13
Glyma20g30660.2 59 1e-09
Glyma20g30660.1 59 1e-09
Glyma01g37940.1 57 3e-09
Glyma16g25210.1 57 4e-09
Glyma02g06180.1 56 7e-09
Glyma08g19520.4 56 8e-09
Glyma08g19520.3 56 8e-09
Glyma08g19520.2 56 8e-09
Glyma08g19520.1 56 8e-09
Glyma02g09030.3 56 8e-09
Glyma02g09030.1 56 8e-09
Glyma16g28200.2 56 9e-09
Glyma16g28200.1 56 9e-09
Glyma10g36940.2 56 1e-08
Glyma10g36940.1 56 1e-08
Glyma15g05490.1 56 1e-08
Glyma02g09030.2 56 1e-08
Glyma12g35920.1 55 2e-08
Glyma13g34470.1 55 2e-08
Glyma11g07410.2 55 2e-08
Glyma11g07410.1 55 2e-08
Glyma14g08020.2 49 8e-07
Glyma14g08020.1 49 8e-07
>Glyma13g28620.2
Length = 290
Score = 86.7 bits (213), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 38/45 (84%), Positives = 43/45 (95%)
Query: 30 KFLKSRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
K +KSRSTR+VN+KQVSP+VP GNYPVAH+SYELNVLGSRGPRRM
Sbjct: 95 KIMKSRSTRLVNLKQVSPKVPTGNYPVAHISYELNVLGSRGPRRM 139
>Glyma13g28620.1
Length = 389
Score = 86.7 bits (213), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 38/45 (84%), Positives = 43/45 (95%)
Query: 30 KFLKSRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
K +KSRSTR+VN+KQVSP+VP GNYPVAH+SYELNVLGSRGPRRM
Sbjct: 194 KIMKSRSTRLVNLKQVSPKVPTGNYPVAHISYELNVLGSRGPRRM 238
>Glyma15g10490.1
Length = 385
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 38/45 (84%), Positives = 43/45 (95%)
Query: 30 KFLKSRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
K +KSRSTR+VN+KQVSP+VP GNYPVAH+SYELNVLGSRGPRRM
Sbjct: 190 KIMKSRSTRLVNLKQVSPKVPTGNYPVAHISYELNVLGSRGPRRM 234
>Glyma02g17160.1
Length = 400
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 43/49 (87%)
Query: 26 ILEPKFLKSRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
I K KSRSTR+V++KQVSPRVPAGNYP+AHVSY+LNVLGSRGPR M
Sbjct: 201 IYGAKVTKSRSTRLVSLKQVSPRVPAGNYPIAHVSYDLNVLGSRGPRIM 249
>Glyma07g38150.1
Length = 359
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 39/45 (86%)
Query: 30 KFLKSRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
K KS T++VN KQVSPRVP GNYPVAH+SYELNVLGSRGPRRM
Sbjct: 164 KMTKSCFTKLVNPKQVSPRVPTGNYPVAHISYELNVLGSRGPRRM 208
>Glyma17g02570.1
Length = 392
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 38/45 (84%), Gaps = 3/45 (6%)
Query: 33 KSRSTR-IVNMKQVSPR--VPAGNYPVAHVSYELNVLGSRGPRRM 74
KS ST +VN KQVSPR VP GNYPVAH+SYELNVLGSRGPRRM
Sbjct: 196 KSCSTELVVNSKQVSPRPRVPTGNYPVAHISYELNVLGSRGPRRM 240
>Glyma17g02570.3
Length = 362
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 38/45 (84%), Gaps = 3/45 (6%)
Query: 33 KSRSTR-IVNMKQVSPR--VPAGNYPVAHVSYELNVLGSRGPRRM 74
KS ST +VN KQVSPR VP GNYPVAH+SYELNVLGSRGPRRM
Sbjct: 166 KSCSTELVVNSKQVSPRPRVPTGNYPVAHISYELNVLGSRGPRRM 210
>Glyma17g02570.2
Length = 362
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 38/45 (84%), Gaps = 3/45 (6%)
Query: 33 KSRSTR-IVNMKQVSPR--VPAGNYPVAHVSYELNVLGSRGPRRM 74
KS ST +VN KQVSPR VP GNYPVAH+SYELNVLGSRGPRRM
Sbjct: 166 KSCSTELVVNSKQVSPRPRVPTGNYPVAHISYELNVLGSRGPRRM 210
>Glyma20g30660.2
Length = 430
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 31/32 (96%)
Query: 43 KQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
K+VSP+VP+G+Y +AHV+YELNVLG+RGPRRM
Sbjct: 223 KKVSPKVPSGSYNIAHVTYELNVLGTRGPRRM 254
>Glyma20g30660.1
Length = 430
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 31/32 (96%)
Query: 43 KQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
K+VSP+VP+G+Y +AHV+YELNVLG+RGPRRM
Sbjct: 223 KKVSPKVPSGSYNIAHVTYELNVLGTRGPRRM 254
>Glyma01g37940.1
Length = 415
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 34/41 (82%)
Query: 34 SRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
+RS+R + KQVSPRVPA NY V+ ++YELNVL +RGPRRM
Sbjct: 216 NRSSRRFHSKQVSPRVPACNYVVSTIAYELNVLRARGPRRM 256
>Glyma16g25210.1
Length = 414
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 34 SRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
+S+R + KQVSPR+PA NY V+ VSYELNVL +RGPRRM
Sbjct: 216 CQSSRRFHSKQVSPRLPACNYLVSTVSYELNVLCTRGPRRM 256
>Glyma02g06180.1
Length = 414
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 34 SRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
+S+R + KQVSPRVPA +Y V+ VSYELNVL +RGPRRM
Sbjct: 216 CQSSRRFHSKQVSPRVPACSYLVSTVSYELNVLCTRGPRRM 256
>Glyma08g19520.4
Length = 427
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 35/43 (81%)
Query: 32 LKSRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
+ +++R K+VSP+VP+G+Y +A V+YELNVLG+RGPR+M
Sbjct: 216 MTGKTSRRFYSKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKM 258
>Glyma08g19520.3
Length = 427
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 35/43 (81%)
Query: 32 LKSRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
+ +++R K+VSP+VP+G+Y +A V+YELNVLG+RGPR+M
Sbjct: 216 MTGKTSRRFYSKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKM 258
>Glyma08g19520.2
Length = 427
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 35/43 (81%)
Query: 32 LKSRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
+ +++R K+VSP+VP+G+Y +A V+YELNVLG+RGPR+M
Sbjct: 216 MTGKTSRRFYSKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKM 258
>Glyma08g19520.1
Length = 427
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 35/43 (81%)
Query: 32 LKSRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
+ +++R K+VSP+VP+G+Y +A V+YELNVLG+RGPR+M
Sbjct: 216 MTGKTSRRFYSKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKM 258
>Glyma02g09030.3
Length = 424
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 35 RSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
RS R + K+VSP+VP+G+Y +A ++YELNVLG+RGPRRM
Sbjct: 215 RSRRFYS-KKVSPKVPSGSYNIAQITYELNVLGTRGPRRM 253
>Glyma02g09030.1
Length = 424
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 35 RSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
RS R + K+VSP+VP+G+Y +A ++YELNVLG+RGPRRM
Sbjct: 215 RSRRFYS-KKVSPKVPSGSYNIAQITYELNVLGTRGPRRM 253
>Glyma16g28200.2
Length = 424
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 35 RSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
RS R + K+VSP+VP+G+Y +A ++YELNVLG+RGPRRM
Sbjct: 215 RSRRFYS-KKVSPKVPSGSYNIAQITYELNVLGTRGPRRM 253
>Glyma16g28200.1
Length = 424
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 35 RSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
RS R + K+VSP+VP+G+Y +A ++YELNVLG+RGPRRM
Sbjct: 215 RSRRFYS-KKVSPKVPSGSYNIAQITYELNVLGTRGPRRM 253
>Glyma10g36940.2
Length = 430
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 30/32 (93%)
Query: 43 KQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
K+VSP+VP+G+Y +A V+YELNVLG+RGPRRM
Sbjct: 223 KKVSPKVPSGSYNIAQVTYELNVLGTRGPRRM 254
>Glyma10g36940.1
Length = 430
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 30/32 (93%)
Query: 43 KQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
K+VSP+VP+G+Y +A V+YELNVLG+RGPRRM
Sbjct: 223 KKVSPKVPSGSYNIAQVTYELNVLGTRGPRRM 254
>Glyma15g05490.1
Length = 427
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 34/40 (85%)
Query: 35 RSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
+++R K+VSP+VP+G+Y +A V+YELNVLG+RGPR+M
Sbjct: 219 KTSRRFYSKKVSPKVPSGSYNIAQVTYELNVLGTRGPRKM 258
>Glyma02g09030.2
Length = 407
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 35 RSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
RS R + K+VSP+VP+G+Y +A ++YELNVLG+RGPRRM
Sbjct: 215 RSRRFYS-KKVSPKVPSGSYNIAQITYELNVLGTRGPRRM 253
>Glyma12g35920.1
Length = 378
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%)
Query: 34 SRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
R++R KQ+SP+VPAGN+ V VSY+ N+L SRGPRRM
Sbjct: 207 GRASRRFASKQISPQVPAGNFEVGQVSYKFNLLKSRGPRRM 247
>Glyma13g34470.1
Length = 381
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%)
Query: 34 SRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
R++R KQ+SP+VPAGN+ V VSY+ N+L SRGPRRM
Sbjct: 209 GRASRRFASKQISPQVPAGNFEVGQVSYKFNLLKSRGPRRM 249
>Glyma11g07410.2
Length = 414
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 34 SRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
S+ +R + KQVSPRVPA NY V+ ++YELNVL +RGPRRM
Sbjct: 216 SQPSRRFHSKQVSPRVPACNYVVSTIAYELNVLRARGPRRM 256
>Glyma11g07410.1
Length = 414
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 34 SRSTRIVNMKQVSPRVPAGNYPVAHVSYELNVLGSRGPRRM 74
S+ +R + KQVSPRVPA NY V+ ++YELNVL +RGPRRM
Sbjct: 216 SQPSRRFHSKQVSPRVPACNYVVSTIAYELNVLRARGPRRM 256
>Glyma14g08020.2
Length = 423
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 32 LKSRSTRIVNMKQVSP-RVPAGNYPVAHVSYELNVLGSRGPRRM 74
L + + V++KQV P +V A NY VA VSYELNVL +RGPRRM
Sbjct: 220 LNCKLQQRVHLKQVLPNKVSAANYKVATVSYELNVLRTRGPRRM 263
>Glyma14g08020.1
Length = 423
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 32 LKSRSTRIVNMKQVSP-RVPAGNYPVAHVSYELNVLGSRGPRRM 74
L + + V++KQV P +V A NY VA VSYELNVL +RGPRRM
Sbjct: 220 LNCKLQQRVHLKQVLPNKVSAANYKVATVSYELNVLRTRGPRRM 263