Jatropha Genome Database

JcPR01D6PKT.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR01D6PKT.10 + phase: 2 /partial
         (98 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g35650.1                                                       139   9e-34
Glyma14g09510.1                                                       139   9e-34
Glyma14g09510.3                                                       138   1e-33
Glyma14g09510.2                                                       138   1e-33
Glyma06g04590.2                                                       135   1e-32
Glyma06g04590.1                                                       134   2e-32
Glyma04g04470.1                                                       132   1e-31
Glyma05g07420.1                                                       107   4e-24

>Glyma17g35650.1 
          Length = 326

 Score =  139 bits (349), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 70/87 (80%), Positives = 76/87 (87%)

Query: 1   LCGISCTGEGEAIIRSTLARDVAAVMEYKGLGLQKAVDFVINERLDEGKAGLIAVSSKGE 60
           +CG+SCTGEGEAIIR TLAR+VAAVMEYKGL LQ+AVDFVI  RLDEG AGLIAVS+ GE
Sbjct: 240 VCGVSCTGEGEAIIRGTLAREVAAVMEYKGLKLQEAVDFVIKHRLDEGMAGLIAVSNAGE 299

Query: 61  VACRSNANGMFRGCATEDGFMEVGILE 87
           VA   N NGMFRGCATE+GFMEVGI E
Sbjct: 300 VAYGFNCNGMFRGCATENGFMEVGIWE 326


>Glyma14g09510.1 
          Length = 326

 Score =  139 bits (349), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 70/87 (80%), Positives = 76/87 (87%)

Query: 1   LCGISCTGEGEAIIRSTLARDVAAVMEYKGLGLQKAVDFVINERLDEGKAGLIAVSSKGE 60
           +CG+SCTGEGEAIIR TLAR+VAAVMEYKGL LQ+AVDFVI  RLDEG AGLIAVS+ GE
Sbjct: 240 VCGVSCTGEGEAIIRGTLAREVAAVMEYKGLKLQEAVDFVIKHRLDEGMAGLIAVSNAGE 299

Query: 61  VACRSNANGMFRGCATEDGFMEVGILE 87
           VA   N NGMFRGCATE+GFMEVGI E
Sbjct: 300 VAYGFNCNGMFRGCATENGFMEVGIWE 326


>Glyma14g09510.3 
          Length = 247

 Score =  138 bits (348), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/87 (80%), Positives = 76/87 (87%)

Query: 1   LCGISCTGEGEAIIRSTLARDVAAVMEYKGLGLQKAVDFVINERLDEGKAGLIAVSSKGE 60
           +CG+SCTGEGEAIIR TLAR+VAAVMEYKGL LQ+AVDFVI  RLDEG AGLIAVS+ GE
Sbjct: 161 VCGVSCTGEGEAIIRGTLAREVAAVMEYKGLKLQEAVDFVIKHRLDEGMAGLIAVSNAGE 220

Query: 61  VACRSNANGMFRGCATEDGFMEVGILE 87
           VA   N NGMFRGCATE+GFMEVGI E
Sbjct: 221 VAYGFNCNGMFRGCATENGFMEVGIWE 247


>Glyma14g09510.2 
          Length = 247

 Score =  138 bits (348), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/87 (80%), Positives = 76/87 (87%)

Query: 1   LCGISCTGEGEAIIRSTLARDVAAVMEYKGLGLQKAVDFVINERLDEGKAGLIAVSSKGE 60
           +CG+SCTGEGEAIIR TLAR+VAAVMEYKGL LQ+AVDFVI  RLDEG AGLIAVS+ GE
Sbjct: 161 VCGVSCTGEGEAIIRGTLAREVAAVMEYKGLKLQEAVDFVIKHRLDEGMAGLIAVSNAGE 220

Query: 61  VACRSNANGMFRGCATEDGFMEVGILE 87
           VA   N NGMFRGCATE+GFMEVGI E
Sbjct: 221 VAYGFNCNGMFRGCATENGFMEVGIWE 247


>Glyma06g04590.2 
          Length = 320

 Score =  135 bits (340), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/87 (75%), Positives = 76/87 (87%)

Query: 1   LCGISCTGEGEAIIRSTLARDVAAVMEYKGLGLQKAVDFVINERLDEGKAGLIAVSSKGE 60
           +CG+SCTGEGEAIIR TLAR+VAAVMEYKGLGL++AV++V+  RLD GKAGLIAVSS GE
Sbjct: 234 VCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLEEAVEYVMEHRLDGGKAGLIAVSSSGE 293

Query: 61  VACRSNANGMFRGCATEDGFMEVGILE 87
           VA   N+N MFR CAT+DGFMEVGI E
Sbjct: 294 VAYGFNSNAMFRACATQDGFMEVGIWE 320


>Glyma06g04590.1 
          Length = 327

 Score =  134 bits (338), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/87 (75%), Positives = 76/87 (87%)

Query: 1   LCGISCTGEGEAIIRSTLARDVAAVMEYKGLGLQKAVDFVINERLDEGKAGLIAVSSKGE 60
           +CG+SCTGEGEAIIR TLAR+VAAVMEYKGLGL++AV++V+  RLD GKAGLIAVSS GE
Sbjct: 241 VCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLEEAVEYVMEHRLDGGKAGLIAVSSSGE 300

Query: 61  VACRSNANGMFRGCATEDGFMEVGILE 87
           VA   N+N MFR CAT+DGFMEVGI E
Sbjct: 301 VAYGFNSNAMFRACATQDGFMEVGIWE 327


>Glyma04g04470.1 
          Length = 327

 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/87 (75%), Positives = 75/87 (86%)

Query: 1   LCGISCTGEGEAIIRSTLARDVAAVMEYKGLGLQKAVDFVINERLDEGKAGLIAVSSKGE 60
           +CG+SCTGEGEAIIR TLAR+VAAVMEYKGL LQ AVDFV+ +RL+ GKAGLIAVS+ G+
Sbjct: 241 VCGVSCTGEGEAIIRGTLAREVAAVMEYKGLELQGAVDFVMEQRLEGGKAGLIAVSNTGD 300

Query: 61  VACRSNANGMFRGCATEDGFMEVGILE 87
           VA   N+N MFR CATEDGFMEVGI E
Sbjct: 301 VAYGFNSNAMFRACATEDGFMEVGIWE 327


>Glyma05g07420.1 
          Length = 322

 Score =  107 bits (266), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/84 (60%), Positives = 65/84 (77%)

Query: 2   CGISCTGEGEAIIRSTLARDVAAVMEYKGLGLQKAVDFVINERLDEGKAGLIAVSSKGEV 61
           C +S TG+GEAIIR T+ARDVAA+ME+KGL L +A + V++ER  +G  GL+AVS+KGEV
Sbjct: 232 CAVSATGKGEAIIRGTVARDVAALMEFKGLSLVEAANCVVHERTPKGTVGLVAVSAKGEV 291

Query: 62  ACRSNANGMFRGCATEDGFMEVGI 85
           A   N  GMFR CATEDG+ E+ I
Sbjct: 292 AMPFNTTGMFRACATEDGYSEIAI 315