Jatropha Genome Database

JcPR01BVAYK.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR01BVAYK.10 + phase: 0 /partial
         (64 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g01680.1                                                        86   1e-17
Glyma08g44290.1                                                        80   3e-16
Glyma18g08410.1                                                        80   7e-16
Glyma10g14870.1                                                        79   8e-16
Glyma17g27200.1                                                        79   9e-16
Glyma17g23670.1                                                        79   1e-15
Glyma02g47070.1                                                        79   1e-15
Glyma17g27150.1                                                        77   6e-15
Glyma11g37530.1                                                        68   2e-12
Glyma06g34230.1                                                        67   3e-12
Glyma05g02930.1                                                        67   4e-12
Glyma18g01480.1                                                        66   9e-12
Glyma17g13590.1                                                        64   3e-11
Glyma02g47830.1                                                        59   1e-09
Glyma12g11010.1                                                        59   1e-09
Glyma01g24790.1                                                        59   2e-09
Glyma18g43890.1                                                        59   2e-09
Glyma06g38350.1                                                        58   2e-09
Glyma04g26660.1                                                        55   1e-08
Glyma16g12160.1                                                        53   6e-08
Glyma18g36000.1                                                        52   2e-07
Glyma08g46400.1                                                        52   2e-07
Glyma08g46400.2                                                        52   2e-07
Glyma03g19920.1                                                        51   3e-07

>Glyma14g01680.1 
          Length = 62

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/45 (88%), Positives = 44/45 (97%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPARDNS 45
          +PLPKFGEWDVNDPASAEG+TVIFNKARNEKKTGGKPDSPA+ N+
Sbjct: 4  RPLPKFGEWDVNDPASAEGYTVIFNKARNEKKTGGKPDSPAKVNN 48


>Glyma08g44290.1 
          Length = 104

 Score = 80.5 bits (197), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 36/42 (85%), Positives = 40/42 (95%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPAR 42
          +PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P+SP +
Sbjct: 4  RPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGNPESPGK 45


>Glyma18g08410.1 
          Length = 79

 Score = 79.7 bits (195), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 36/42 (85%), Positives = 39/42 (92%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPAR 42
          +PLPKFGEWDVNDP SAEGFTVIFNKAR+EKKTGG PDSP +
Sbjct: 6  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGNPDSPGK 47


>Glyma10g14870.1 
          Length = 64

 Score = 79.3 bits (194), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 36/42 (85%), Positives = 39/42 (92%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPAR 42
          +PLPKFGEWDVNDP SAEGFTVIFNKAR+EKKTGG PDSP +
Sbjct: 5  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGNPDSPGK 46


>Glyma17g27200.1 
          Length = 69

 Score = 79.3 bits (194), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 36/42 (85%), Positives = 39/42 (92%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPAR 42
          +PLPKFGEWDVNDP SAEGFTVIFNKAR+EKKTGG PDSP +
Sbjct: 6  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGNPDSPRK 47


>Glyma17g23670.1 
          Length = 66

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/42 (85%), Positives = 39/42 (92%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPAR 42
          +PLPKFGEWDVNDP SAEGFTVIFNKAR+EKKTGG PDSP +
Sbjct: 4  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGNPDSPGK 45


>Glyma02g47070.1 
          Length = 78

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/45 (84%), Positives = 43/45 (95%), Gaps = 1/45 (2%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKT-GGKPDSPARDN 44
          +PLPKFGEWDVNDPASAEG+TVIFNKARN+KKT GGKP+SPA+ N
Sbjct: 6  RPLPKFGEWDVNDPASAEGYTVIFNKARNDKKTGGGKPESPAKVN 50


>Glyma17g27150.1 
          Length = 63

 Score = 76.6 bits (187), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 35/42 (83%), Positives = 38/42 (90%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPAR 42
          +PLPKFGEWDVNDP SAE FTVIFNKAR+EKKTGG PDSP +
Sbjct: 4  RPLPKFGEWDVNDPTSAEEFTVIFNKARDEKKTGGNPDSPGK 45


>Glyma11g37530.1 
          Length = 77

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/34 (88%), Positives = 32/34 (94%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTG 34
          +PLPKFGEWDVNDPASAEGFTVIFNKAR+EKK  
Sbjct: 10 KPLPKFGEWDVNDPASAEGFTVIFNKARDEKKIA 43


>Glyma06g34230.1 
          Length = 40

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/35 (88%), Positives = 33/35 (94%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGG 35
          +PLPKFGEWDVNDPAS E FTVIFNKAR+EKKTGG
Sbjct: 2  KPLPKFGEWDVNDPASTEEFTVIFNKARDEKKTGG 36


>Glyma05g02930.1 
          Length = 72

 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 2/48 (4%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPARDNSSFK 48
          +PLPKFGEWDVN+PASAEGFTVIFNKAR+EKKT     +P R +  FK
Sbjct: 8  RPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNTA--TPRRSDPVFK 53


>Glyma18g01480.1 
          Length = 80

 Score = 65.9 bits (159), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTG 34
          +PLPKFGEWDVNDPASAEGFTVIFNKAR++KK  
Sbjct: 10 KPLPKFGEWDVNDPASAEGFTVIFNKARDDKKIA 43


>Glyma17g13590.1 
          Length = 68

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 29/32 (90%), Positives = 32/32 (100%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKK 32
          +PLPKFGEWDVN+PASAEGFTVIFNKAR+EKK
Sbjct: 7  RPLPKFGEWDVNNPASAEGFTVIFNKARDEKK 38


>Glyma02g47830.1 
          Length = 80

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 3/61 (4%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGG-KPDSPARDNSSFK--PGSNTLGKP 57
          + LPKFG+WDVN+P++A+ F+VIFNKARNE+KTG  K   P   N++ K  P    LGK 
Sbjct: 6  RALPKFGDWDVNNPSAAQDFSVIFNKARNERKTGANKIHFPPNHNNTTKCNPPQVVLGKS 65

Query: 58 Q 58
           
Sbjct: 66 H 66


>Glyma12g11010.1 
          Length = 55

 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/33 (81%), Positives = 29/33 (87%)

Query: 10 DVNDPASAEGFTVIFNKARNEKKTGGKPDSPAR 42
          DVN P SAEGFTVIFNKAR+EKKTGG PDSP +
Sbjct: 1  DVNHPTSAEGFTVIFNKARDEKKTGGNPDSPGK 33


>Glyma01g24790.1 
          Length = 53

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/33 (81%), Positives = 29/33 (87%)

Query: 10 DVNDPASAEGFTVIFNKARNEKKTGGKPDSPAR 42
          DVN P SAEGFTVIFNKAR+EKKTGG PDSP +
Sbjct: 1  DVNHPTSAEGFTVIFNKARDEKKTGGNPDSPGK 33


>Glyma18g43890.1 
          Length = 55

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/33 (81%), Positives = 29/33 (87%)

Query: 10 DVNDPASAEGFTVIFNKARNEKKTGGKPDSPAR 42
          DVN P SAEGFTVIFNKAR+EKKTGG PDSP +
Sbjct: 1  DVNHPTSAEGFTVIFNKARDEKKTGGNPDSPGK 33


>Glyma06g38350.1 
          Length = 51

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/33 (81%), Positives = 29/33 (87%)

Query: 10 DVNDPASAEGFTVIFNKARNEKKTGGKPDSPAR 42
          DVN P SAEGFTVIFNKAR+EKKTGG PDSP +
Sbjct: 1  DVNHPTSAEGFTVIFNKARDEKKTGGNPDSPGK 33


>Glyma04g26660.1 
          Length = 51

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/33 (78%), Positives = 28/33 (84%)

Query: 10 DVNDPASAEGFTVIFNKARNEKKTGGKPDSPAR 42
          DVN P SAEGFTVIFNKA +EKKTGG PDSP +
Sbjct: 1  DVNHPTSAEGFTVIFNKAGDEKKTGGNPDSPGK 33


>Glyma16g12160.1 
          Length = 246

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 28/32 (87%)

Query: 3   LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG 34
           +PKFG+WDVN+PASA+GFT IFNK R E++ G
Sbjct: 180 VPKFGDWDVNNPASADGFTHIFNKVREERQGG 211


>Glyma18g36000.1 
          Length = 246

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 27/32 (84%)

Query: 3   LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG 34
           +PKFGEWD ++PASA+G+T IFNK R EK+ G
Sbjct: 181 VPKFGEWDESNPASADGYTHIFNKVREEKQVG 212


>Glyma08g46400.1 
          Length = 248

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 27/32 (84%)

Query: 3   LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG 34
           +PKFGEWD ++PASA+G+T IFNK R EK+ G
Sbjct: 183 VPKFGEWDESNPASADGYTHIFNKVREEKQVG 214


>Glyma08g46400.2 
          Length = 237

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 27/32 (84%)

Query: 3   LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG 34
           +PKFGEWD ++PASA+G+T IFNK R EK+ G
Sbjct: 172 VPKFGEWDESNPASADGYTHIFNKVREEKQVG 203


>Glyma03g19920.1 
          Length = 246

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 27/30 (90%)

Query: 3   LPKFGEWDVNDPASAEGFTVIFNKARNEKK 32
           +PKFG+WDVN+P+SA+GFT IFNK R E++
Sbjct: 180 VPKFGDWDVNNPSSADGFTHIFNKVREERQ 209