Jatropha Genome Database

JcCD0179138.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0179138.10 + phase: 1 /pseudo/partial
         (194 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g44010.1                                                       238   2e-63
Glyma20g38740.1                                                       238   2e-63

>Glyma10g44010.1 
          Length = 636

 Score =  238 bits (608), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 114/138 (82%), Positives = 121/138 (87%)

Query: 14  GPGGFVVTEAGFGADIGTEKFMNIKCRYSGLMPQCAIIVATIRALKMHGGGPEVVAGRPL 73
           GPGGFVVTEAGFGADIG EKFMNIKCRYSGL PQCAIIVATIRALKMHGGGP VVAG+PL
Sbjct: 361 GPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAIIVATIRALKMHGGGPAVVAGKPL 420

Query: 74  DHAYTTENVPLVEAGCVNLARHISNTKSYGVNVVVAVNMFSTDTEAELSAVKNXXXXXXX 133
           DHAY TENV LVEAGCVN+ARHISNTKSYGVNVVVA+N FSTDTEAEL+AV++       
Sbjct: 421 DHAYLTENVALVEAGCVNMARHISNTKSYGVNVVVAINKFSTDTEAELNAVQSAALAAGA 480

Query: 134 XXXVVCTHHAHGGKGAVS 151
              V+CTHHAHGGKGAV 
Sbjct: 481 YDAVICTHHAHGGKGAVD 498


>Glyma20g38740.1 
          Length = 636

 Score =  238 bits (608), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 114/138 (82%), Positives = 121/138 (87%)

Query: 14  GPGGFVVTEAGFGADIGTEKFMNIKCRYSGLMPQCAIIVATIRALKMHGGGPEVVAGRPL 73
           GPGGFVVTEAGFGADIG EKFMNIKCRYSGL PQCAIIVATIRALKMHGGGP VVAGRPL
Sbjct: 361 GPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAIIVATIRALKMHGGGPAVVAGRPL 420

Query: 74  DHAYTTENVPLVEAGCVNLARHISNTKSYGVNVVVAVNMFSTDTEAELSAVKNXXXXXXX 133
           DHAY TENV LVEAGCVN+ARHISNTKSYGVNVVVA+N FSTDTEAEL+AV++       
Sbjct: 421 DHAYLTENVALVEAGCVNMARHISNTKSYGVNVVVAINKFSTDTEAELNAVRSAALAAGA 480

Query: 134 XXXVVCTHHAHGGKGAVS 151
              V+CTHHA+GGKGAV 
Sbjct: 481 YDAVICTHHANGGKGAVD 498