Jatropha Genome Database
- JcCD0139939.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCD0139939.10 - phase: 0 /partial
(56 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g42470.1 94 5e-20
Glyma03g30070.2 89 1e-18
Glyma03g30070.1 89 1e-18
Glyma20g24530.5 88 2e-18
Glyma20g24530.4 88 2e-18
Glyma20g24530.3 88 2e-18
Glyma20g24530.2 88 2e-18
Glyma20g24530.1 88 2e-18
Glyma19g32940.1 88 2e-18
Glyma09g17170.1 88 3e-18
Glyma19g32930.1 87 4e-18
Glyma15g23200.1 62 9e-11
Glyma03g30050.1 57 6e-09
Glyma03g30060.1 55 2e-08
Glyma03g07570.1 48 2e-06
Glyma07g18350.1 47 6e-06
Glyma01g29630.2 46 8e-06
Glyma01g29630.1 46 8e-06
Glyma02g39230.1 46 9e-06
>Glyma10g42470.1
Length = 387
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 45/50 (90%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQFDRTPFFKAMWREGKKSAFT 50
VAHHLFSTMPHYHAMEATNAIKPILGEYYQFD TPF+KA+WRE ++ +
Sbjct: 320 VAHHLFSTMPHYHAMEATNAIKPILGEYYQFDDTPFYKALWREARECLYV 369
>Glyma03g30070.2
Length = 383
Score = 89.0 bits (219), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/49 (79%), Positives = 43/49 (87%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQFDRTPFFKAMWREGKKSAF 49
VAHHLFSTMPHYHAMEAT AIKPILGEYY+FD TPF KAMWRE ++ +
Sbjct: 316 VAHHLFSTMPHYHAMEATKAIKPILGEYYRFDETPFVKAMWREARECIY 364
>Glyma03g30070.1
Length = 383
Score = 89.0 bits (219), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/49 (79%), Positives = 43/49 (87%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQFDRTPFFKAMWREGKKSAF 49
VAHHLFSTMPHYHAMEAT AIKPILGEYY+FD TPF KAMWRE ++ +
Sbjct: 316 VAHHLFSTMPHYHAMEATKAIKPILGEYYRFDETPFVKAMWREARECIY 364
>Glyma20g24530.5
Length = 379
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQFDRTPFFKAMWREGKKSAFT 50
VAHHLFSTMPHYHA EATNA+KPILGEYY+FD TPF+KA+WRE ++ +
Sbjct: 312 VAHHLFSTMPHYHATEATNAMKPILGEYYRFDDTPFYKALWREARECLYV 361
>Glyma20g24530.4
Length = 387
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQFDRTPFFKAMWREGKKSAFT 50
VAHHLFSTMPHYHA EATNA+KPILGEYY+FD TPF+KA+WRE ++ +
Sbjct: 320 VAHHLFSTMPHYHATEATNAMKPILGEYYRFDDTPFYKALWREARECLYV 369
>Glyma20g24530.3
Length = 387
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQFDRTPFFKAMWREGKKSAFT 50
VAHHLFSTMPHYHA EATNA+KPILGEYY+FD TPF+KA+WRE ++ +
Sbjct: 320 VAHHLFSTMPHYHATEATNAMKPILGEYYRFDDTPFYKALWREARECLYV 369
>Glyma20g24530.2
Length = 387
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQFDRTPFFKAMWREGKKSAFT 50
VAHHLFSTMPHYHA EATNA+KPILGEYY+FD TPF+KA+WRE ++ +
Sbjct: 320 VAHHLFSTMPHYHATEATNAMKPILGEYYRFDDTPFYKALWREARECLYV 369
>Glyma20g24530.1
Length = 387
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQFDRTPFFKAMWREGKKSAFT 50
VAHHLFSTMPHYHA EATNA+KPILGEYY+FD TPF+KA+WRE ++ +
Sbjct: 320 VAHHLFSTMPHYHATEATNAMKPILGEYYRFDDTPFYKALWREARECLYV 369
>Glyma19g32940.1
Length = 383
Score = 87.8 bits (216), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/49 (79%), Positives = 43/49 (87%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQFDRTPFFKAMWREGKKSAF 49
VAHHLFSTMPHYHAMEAT AIKPILGEYY+FD TPF KAMWRE ++ +
Sbjct: 316 VAHHLFSTMPHYHAMEATKAIKPILGEYYRFDGTPFVKAMWREARECIY 364
>Glyma09g17170.1
Length = 386
Score = 87.8 bits (216), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/49 (79%), Positives = 42/49 (85%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQFDRTPFFKAMWREGKKSAF 49
VAHHLFSTMPHYHAMEAT AIKPILGEYY FD TP +KAMWRE K+ +
Sbjct: 319 VAHHLFSTMPHYHAMEATKAIKPILGEYYHFDETPIYKAMWREAKECMY 367
>Glyma19g32930.1
Length = 320
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 42/50 (84%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQFDRTPFFKAMWREGKKSAFT 50
V HHLFSTMPHYHAM+AT AIKPILGEYY+FD TPF KAMWRE ++ +
Sbjct: 255 VVHHLFSTMPHYHAMDATKAIKPILGEYYRFDETPFVKAMWREARECIYV 304
>Glyma15g23200.1
Length = 255
Score = 62.4 bits (150), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/29 (96%), Positives = 28/29 (96%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYY 29
VAHHLFSTMPHYHAMEAT AIKPILGEYY
Sbjct: 226 VAHHLFSTMPHYHAMEATKAIKPILGEYY 254
>Glyma03g30050.1
Length = 272
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 17 ATNAIKPILGEYYQFDRTPFFKAMWREGKKSAF 49
AT AIKPILGEYYQFD TPF KAMWR+ ++ +
Sbjct: 218 ATKAIKPILGEYYQFDETPFLKAMWRKARECIY 250
>Glyma03g30060.1
Length = 111
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 27/38 (71%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQFDRTPFFK 38
V HHLFSTMPHYHAM AT AIK ILGEYY + +
Sbjct: 61 VVHHLFSTMPHYHAMVATKAIKLILGEYYLLKECIYVE 98
>Glyma03g07570.1
Length = 453
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQ 30
V HHLF +PHYH +EAT A KP+LG+YY+
Sbjct: 376 VIHHLFPQIPHYHLIEATEAAKPVLGQYYR 405
>Glyma07g18350.1
Length = 453
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQ 30
V HHLF +PHYH +EAT A KP+ G+YY+
Sbjct: 376 VIHHLFPQIPHYHLVEATEAAKPVFGKYYR 405
>Glyma01g29630.2
Length = 452
Score = 46.2 bits (108), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQ 30
V HHLF +PHYH +EAT A KP+LG YY+
Sbjct: 375 VIHHLFPQIPHYHLIEATEAAKPVLGLYYR 404
>Glyma01g29630.1
Length = 452
Score = 46.2 bits (108), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQ 30
V HHLF +PHYH +EAT A KP+LG YY+
Sbjct: 375 VIHHLFPQIPHYHLIEATEAAKPVLGLYYR 404
>Glyma02g39230.1
Length = 380
Score = 45.8 bits (107), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 1 VAHHLFSTMPHYHAMEATNAIKPILGEYYQ 30
V HHLF +PHYH +EAT A KP+LG+YY+
Sbjct: 304 VIHHLFPQIPHYHLVEATQAAKPVLGDYYR 333