Jatropha Genome Database

JcCD0139598.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0139598.10 + phase: 1 /partial
         (83 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g38550.1                                                       162   1e-40
Glyma18g47770.1                                                       158   1e-39

>Glyma09g38550.1 
          Length = 295

 Score =  162 bits (409), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 75/83 (90%), Positives = 80/83 (96%)

Query: 1   DYLLFIVRDVNVNPNPNEVADIKYVNRDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFK 60
           DYLLFIVRDVNVNPNP+EVADIKYVNRDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFK
Sbjct: 213 DYLLFIVRDVNVNPNPDEVADIKYVNRDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFK 272

Query: 61  WWEHVEQGTLKDVVDMQTIHKLT 83
           WW+H+EQGTL +  DM+TIHKLT
Sbjct: 273 WWDHLEQGTLGEATDMKTIHKLT 295


>Glyma18g47770.1 
          Length = 301

 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 74/83 (89%), Positives = 80/83 (96%)

Query: 1   DYLLFIVRDVNVNPNPNEVADIKYVNRDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFK 60
           DYLLFIVRDVNVNPNP+EVADIKYVN DQLKELLRKADAGEEGLKLSPWFRLVVDNFLFK
Sbjct: 219 DYLLFIVRDVNVNPNPDEVADIKYVNCDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFK 278

Query: 61  WWEHVEQGTLKDVVDMQTIHKLT 83
           WW+H+E+GTL +V DM+TIHKLT
Sbjct: 279 WWDHLERGTLGEVTDMKTIHKLT 301