Jatropha Genome Database

JcCD0109805.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0109805.10 + phase: 2 /partial
         (75 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g06880.1                                                        78   2e-15
Glyma18g05860.1                                                        72   1e-13
Glyma11g31120.1                                                        71   3e-13
Glyma20g15960.1                                                        65   2e-11
Glyma20g15480.1                                                        64   3e-11
Glyma11g31150.1                                                        59   1e-09

>Glyma13g06880.1 
          Length = 537

 Score = 77.8 bits (190), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/59 (55%), Positives = 44/59 (74%)

Query: 1   DSVFAVLKYIYAFCISDFMPFLLGLDLVGQEKFVLEANKTLRGFHNPLIDERIALWRSG 59
           DS+F +LKY+YAF +SD+MP L GLDL G EK V EA K ++ +H+P++ ERI LW  G
Sbjct: 236 DSIFDLLKYVYAFSVSDYMPCLRGLDLDGHEKNVKEALKIIKKYHDPIVQERIKLWNDG 294


>Glyma18g05860.1 
          Length = 427

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/59 (52%), Positives = 42/59 (71%)

Query: 1   DSVFAVLKYIYAFCISDFMPFLLGLDLVGQEKFVLEANKTLRGFHNPLIDERIALWRSG 59
           DS+F +L YIYAF +SD+MP L GLDL GQEK V EA + ++ +H+P++  RI  W  G
Sbjct: 148 DSIFDLLNYIYAFSVSDYMPCLRGLDLDGQEKKVKEALRIIKKYHDPIVQVRIKQWNDG 206


>Glyma11g31120.1 
          Length = 537

 Score = 70.9 bits (172), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 43/59 (72%)

Query: 1   DSVFAVLKYIYAFCISDFMPFLLGLDLVGQEKFVLEANKTLRGFHNPLIDERIALWRSG 59
           DS+F +L+Y+ AF +SD++P L GLDL G EK V EA K ++ +H+P++ ERI LW  G
Sbjct: 236 DSIFHLLEYVNAFSVSDYVPCLRGLDLDGHEKKVKEALKIIKKYHDPIVQERIKLWNDG 294


>Glyma20g15960.1 
          Length = 504

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/61 (45%), Positives = 43/61 (70%)

Query: 1   DSVFAVLKYIYAFCISDFMPFLLGLDLVGQEKFVLEANKTLRGFHNPLIDERIALWRSGQ 60
           D++F +LKYIY F +SD++P L GLDL G E  V +A +T+  +H+P+I++RI  W  G 
Sbjct: 198 DAIFTMLKYIYDFRVSDYVPCLRGLDLDGHEGKVKKAIETVGKYHDPIIEQRIKEWDEGS 257

Query: 61  R 61
           +
Sbjct: 258 K 258


>Glyma20g15480.1 
          Length = 395

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/61 (45%), Positives = 43/61 (70%)

Query: 1   DSVFAVLKYIYAFCISDFMPFLLGLDLVGQEKFVLEANKTLRGFHNPLIDERIALWRSGQ 60
           DS+F +LKYIY F +SD++PFL GLDL G E  V +A + +  +H+P+I++RI    +G 
Sbjct: 196 DSIFTMLKYIYDFSVSDYVPFLRGLDLDGHEGKVKKALEIVEKYHDPIIEQRIKERNNGS 255

Query: 61  R 61
           +
Sbjct: 256 K 256


>Glyma11g31150.1 
          Length = 364

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 43/61 (70%)

Query: 1   DSVFAVLKYIYAFCISDFMPFLLGLDLVGQEKFVLEANKTLRGFHNPLIDERIALWRSGQ 60
           +++F +LK++YAF +SD++P L  LDL G +  V +  +T++ +H+P+I++R+  W  G 
Sbjct: 227 NTIFTLLKHVYAFSVSDYIPCLRILDLDGHKSKVKKGMRTMKKYHDPIIEKRMKQWNDGS 286

Query: 61  R 61
           +
Sbjct: 287 K 287