Jatropha Genome Database

JcCD0099951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0099951.10 - phase: 0 /partial/short
         (49 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g34650.1                                                        81   2e-16
Glyma19g37310.4                                                        80   5e-16
Glyma19g37310.3                                                        80   5e-16
Glyma19g37310.2                                                        80   5e-16
Glyma19g37310.1                                                        80   5e-16
Glyma09g08790.1                                                        52   1e-07
Glyma17g04180.1                                                        50   4e-07
Glyma07g36390.1                                                        50   4e-07

>Glyma03g34650.1 
          Length = 1174

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/40 (92%), Positives = 39/40 (97%)

Query: 10  SFVSECGIPEAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ 49
           SFVSECG+ EAGLDYGGLSKEFLTDISK+AFSPEYGLFSQ
Sbjct: 837 SFVSECGLLEAGLDYGGLSKEFLTDISKSAFSPEYGLFSQ 876


>Glyma19g37310.4 
          Length = 1171

 Score = 80.1 bits (196), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 39/40 (97%)

Query: 10  SFVSECGIPEAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ 49
           SFVSECG+ EAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ
Sbjct: 834 SFVSECGLLEAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ 873


>Glyma19g37310.3 
          Length = 1171

 Score = 80.1 bits (196), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 39/40 (97%)

Query: 10  SFVSECGIPEAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ 49
           SFVSECG+ EAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ
Sbjct: 834 SFVSECGLLEAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ 873


>Glyma19g37310.2 
          Length = 1171

 Score = 80.1 bits (196), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 39/40 (97%)

Query: 10  SFVSECGIPEAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ 49
           SFVSECG+ EAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ
Sbjct: 834 SFVSECGLLEAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ 873


>Glyma19g37310.1 
          Length = 1171

 Score = 80.1 bits (196), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 39/40 (97%)

Query: 10  SFVSECGIPEAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ 49
           SFVSECG+ EAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ
Sbjct: 834 SFVSECGLLEAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ 873


>Glyma09g08790.1 
          Length = 168

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/30 (90%), Positives = 27/30 (90%), Gaps = 2/30 (6%)

Query: 20  AGLDYGGLSKEFLTDISKAAFSPEYGLFSQ 49
           AGLDYGGLSKEFLTDISKAAFSPE   FSQ
Sbjct: 80  AGLDYGGLSKEFLTDISKAAFSPE--TFSQ 107


>Glyma17g04180.1 
          Length = 1015

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/40 (50%), Positives = 32/40 (80%)

Query: 10  SFVSECGIPEAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ 49
           +FV+E G+ EAG+D GG+ K+F+ +I++AAF  +YGLF +
Sbjct: 685 TFVNEFGVEEAGIDGGGIFKDFMENITRAAFDVQYGLFKE 724


>Glyma07g36390.1 
          Length = 1015

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/40 (50%), Positives = 32/40 (80%)

Query: 10  SFVSECGIPEAGLDYGGLSKEFLTDISKAAFSPEYGLFSQ 49
           +FV+E G+ EAG+D GG+ K+F+ +I++AAF  +YGLF +
Sbjct: 685 TFVNEFGVEEAGIDGGGIFKDFMENITRAAFDVQYGLFKE 724