Jatropha Genome Database

JcCD0081914.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0081914.10 + phase: 0 /partial
         (69 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g37170.2                                                        68   2e-12
Glyma20g37170.1                                                        68   2e-12
Glyma10g30220.1                                                        68   2e-12

>Glyma20g37170.2 
          Length = 569

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/35 (85%), Positives = 31/35 (88%)

Query: 28  KVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFLA 62
           +VDIYESR FIGGKVGSFVDK GNHIEMGLHVF  
Sbjct: 87  EVDIYESRPFIGGKVGSFVDKGGNHIEMGLHVFFG 121


>Glyma20g37170.1 
          Length = 570

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/35 (85%), Positives = 31/35 (88%)

Query: 28  KVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFLA 62
           +VDIYESR FIGGKVGSFVDK GNHIEMGLHVF  
Sbjct: 87  EVDIYESRPFIGGKVGSFVDKGGNHIEMGLHVFFG 121


>Glyma10g30220.1 
          Length = 570

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/35 (85%), Positives = 31/35 (88%)

Query: 28  KVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFLA 62
           +VDIYESR FIGGKVGSFVDK GNHIEMGLHVF  
Sbjct: 87  EVDIYESRPFIGGKVGSFVDKGGNHIEMGLHVFFG 121