Jatropha Genome Database

JcCD0071482.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0071482.10 - phase: 1 /pseudo/partial
         (75 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g02760.1                                                       100   4e-22
Glyma02g17040.1                                                        96   6e-21
Glyma13g38850.1                                                        72   1e-13
Glyma12g31540.1                                                        72   2e-13
Glyma11g18090.1                                                        57   4e-09
Glyma12g10120.1                                                        57   5e-09

>Glyma10g02760.1 
          Length = 936

 Score =  100 bits (249), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/45 (97%), Positives = 45/45 (100%)

Query: 31  VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 75
           VGTMVVFQGGIGPAGHSTDDLYVLDLTNDK+KWHRVVVQGQGPGP
Sbjct: 107 VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGP 151


>Glyma02g17040.1 
          Length = 881

 Score = 96.3 bits (238), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 44/45 (97%), Positives = 45/45 (100%)

Query: 31  VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 75
           VGTMVVFQGGIGPAGHSTDDLYVLDLTNDK+KWHRVVVQGQGPGP
Sbjct: 107 VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGP 151


>Glyma13g38850.1 
          Length = 988

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/45 (73%), Positives = 36/45 (80%)

Query: 31  VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 75
           VGTMVV QGGIGPAG S +DL+VLDLT    +WHRV VQG GPGP
Sbjct: 175 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGP 219


>Glyma12g31540.1 
          Length = 951

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/45 (73%), Positives = 36/45 (80%)

Query: 31  VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 75
           VGTMVV QGGIGPAG S +DL+VLDLT    +WHRV VQG GPGP
Sbjct: 178 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGP 222


>Glyma11g18090.1 
          Length = 1010

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/35 (71%), Positives = 29/35 (82%)

Query: 31  VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHR 65
           VGTMVV QGGIGPAG S +DL+VLDLT  + +WHR
Sbjct: 187 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHR 221


>Glyma12g10120.1 
          Length = 1001

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/35 (71%), Positives = 29/35 (82%)

Query: 31  VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHR 65
           VGTMVV QGGIGPAG S +DL+VLDLT  + +WHR
Sbjct: 179 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHR 213