Jatropha Genome Database

JcCD0068708.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0068708.10 + phase: 0 
         (82 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g00330.1                                                       117   2e-27
Glyma03g27630.1                                                       116   5e-27
Glyma03g27670.1                                                       115   1e-26
Glyma08g24160.1                                                       115   1e-26
Glyma15g07110.1                                                       105   9e-24
Glyma08g03060.1                                                        88   2e-18
Glyma08g03060.2                                                        88   2e-18
Glyma09g16720.1                                                        88   2e-18
Glyma01g00430.2                                                        86   7e-18
Glyma01g00430.1                                                        86   7e-18
Glyma20g33450.1                                                        85   2e-17
Glyma01g00450.1                                                        75   2e-14
Glyma08g15760.1                                                        73   7e-14
Glyma18g15550.1                                                        60   6e-10

>Glyma07g00330.1 
          Length = 762

 Score =  117 bits (294), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 61/68 (89%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MWRLKIA+GGN+PY++STNN+VGRQ WEFDP+AG+PEERA VE  RQ+FY+NR +VKP +
Sbjct: 1  MWRLKIADGGNDPYIFSTNNFVGRQTWEFDPEAGSPEERAQVEAARQHFYHNRFKVKPCA 60

Query: 61 DLLWRMQV 68
          DLLWR QV
Sbjct: 61 DLLWRFQV 68


>Glyma03g27630.1 
          Length = 158

 Score =  116 bits (291), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 58/68 (85%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MWRLKIA+GG +PY++STNN+VGRQ WEFDP+AGTPEERA VE  RQNFYNNR +VK   
Sbjct: 1  MWRLKIADGGKDPYIFSTNNFVGRQTWEFDPEAGTPEERAQVEAARQNFYNNRFKVKACG 60

Query: 61 DLLWRMQV 68
          DLLWR Q+
Sbjct: 61 DLLWRFQI 68


>Glyma03g27670.1 
          Length = 199

 Score =  115 bits (288), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 57/68 (83%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MWRLKIA+GG +PY++STNN+VGRQ WEFDP+AGTPEERA VE  RQNFYNNR + K   
Sbjct: 1  MWRLKIADGGKDPYIFSTNNFVGRQTWEFDPEAGTPEERAQVEAARQNFYNNRFKFKACG 60

Query: 61 DLLWRMQV 68
          DLLWR Q+
Sbjct: 61 DLLWRFQI 68


>Glyma08g24160.1 
          Length = 762

 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 60/68 (88%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MWRLKIAEGGNE Y++STNN+VGRQ WEFDP+AGTPEERA VE  R++FY++R +VKP +
Sbjct: 1  MWRLKIAEGGNEAYIFSTNNFVGRQTWEFDPEAGTPEERAQVEAARKDFYHHRFKVKPCA 60

Query: 61 DLLWRMQV 68
          DLLWR Q+
Sbjct: 61 DLLWRFQI 68


>Glyma15g07110.1 
          Length = 694

 Score =  105 bits (262), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 45/65 (69%), Positives = 52/65 (80%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MWRLKIA+GGN+PY++STNN+VGRQ WEFD +AGT EERA +E  RQNFY NR  VK   
Sbjct: 1  MWRLKIADGGNDPYIFSTNNFVGRQTWEFDSEAGTAEERAQIEAARQNFYENRFMVKACG 60

Query: 61 DLLWR 65
          D LWR
Sbjct: 61 DRLWR 65


>Glyma08g03060.1 
          Length = 763

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 53/68 (77%), Gaps = 2/68 (2%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MW+LKIAEGG+   L S NN++GRQ WEFDP+AGTP+ERA VE+VR+ +  NR  +K S 
Sbjct: 1  MWKLKIAEGGDG--LISVNNFIGRQHWEFDPNAGTPQERAQVERVREEYKKNRFCIKQSG 58

Query: 61 DLLWRMQV 68
          DLL RMQ+
Sbjct: 59 DLLMRMQL 66


>Glyma08g03060.2 
          Length = 671

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 53/68 (77%), Gaps = 2/68 (2%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MW+LKIAEGG+   L S NN++GRQ WEFDP+AGTP+ERA VE+VR+ +  NR  +K S 
Sbjct: 1  MWKLKIAEGGDG--LISVNNFIGRQHWEFDPNAGTPQERAQVERVREEYKKNRFCIKQSG 58

Query: 61 DLLWRMQV 68
          DLL RMQ+
Sbjct: 59 DLLMRMQL 66


>Glyma09g16720.1 
          Length = 67

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 50/67 (74%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MWR+KIA+GG + +++ TNN++GRQ+WEFD    T EERA VE  R++F+ NR ++K S 
Sbjct: 1  MWRIKIADGGKDAHIFGTNNFLGRQVWEFDTKTVTHEERAQVEAAREDFFRNRFKIKTSG 60

Query: 61 DLLWRMQ 67
          D LW+ Q
Sbjct: 61 DRLWQFQ 67


>Glyma01g00430.2 
          Length = 746

 Score = 86.3 bits (212), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 1/67 (1%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MW+LK AEGGN P+L + NN+VGRQ+WEFDP  G+P++   +E+ RQNF++NR   K S+
Sbjct: 1  MWKLKFAEGGN-PWLRTLNNHVGRQVWEFDPKLGSPQDLLEIEKARQNFHDNRFTHKHSA 59

Query: 61 DLLWRMQ 67
          DLL RMQ
Sbjct: 60 DLLMRMQ 66


>Glyma01g00430.1 
          Length = 757

 Score = 86.3 bits (212), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 1/67 (1%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MW+LK AEGGN P+L + NN+VGRQ+WEFDP  G+P++   +E+ RQNF++NR   K S+
Sbjct: 1  MWKLKFAEGGN-PWLRTLNNHVGRQVWEFDPKLGSPQDLLEIEKARQNFHDNRFTHKHSA 59

Query: 61 DLLWRMQ 67
          DLL RMQ
Sbjct: 60 DLLMRMQ 66


>Glyma20g33450.1 
          Length = 755

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 51/68 (75%), Gaps = 2/68 (2%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MW+LKIAEGG    L S N+++GRQ W FDP+AGTP+ERA VE++R  F  NR  +K S+
Sbjct: 1  MWKLKIAEGGKG--LISVNDFIGRQHWIFDPNAGTPQERAEVERLRHQFTKNRFSIKQSA 58

Query: 61 DLLWRMQV 68
          DLL RMQ+
Sbjct: 59 DLLMRMQL 66


>Glyma01g00450.1 
          Length = 767

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%)

Query: 1  MWRLKIAEGGNEPYLY-STNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPS 59
          MW+LK ++   + ++  S NN++GRQ WEFDP  GT EERA VEQV + F  NR + K S
Sbjct: 1  MWKLKFSKSNEDEWIMQSVNNHIGRQFWEFDPHLGTKEERAQVEQVHKEFNKNRFKYKHS 60

Query: 60 SDLLWRMQ 67
          SDLL R+Q
Sbjct: 61 SDLLMRLQ 68


>Glyma08g15760.1 
          Length = 246

 Score = 73.2 bits (178), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 49/68 (72%)

Query: 1  MWRLKIAEGGNEPYLYSTNNYVGRQIWEFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSS 60
          MWRLKIA GG +PY++STNN++G +IWEFDP+A   EE+A VE  R+NFY+N    +   
Sbjct: 1  MWRLKIANGGKDPYIFSTNNFLGWEIWEFDPEACIEEEKAEVEAARENFYDNLFNFRACG 60

Query: 61 DLLWRMQV 68
          D LW  Q+
Sbjct: 61 DRLWWFQI 68


>Glyma18g15550.1 
          Length = 105

 Score = 59.7 bits (143), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 26/41 (63%), Positives = 31/41 (75%)

Query: 28 EFDPDAGTPEERAAVEQVRQNFYNNRXQVKPSSDLLWRMQV 68
          EFDP+A TPEERA VE   Q+FY+NR + KP +DLLW  QV
Sbjct: 4  EFDPEADTPEERAQVEAACQHFYHNRFKAKPCADLLWCFQV 44