Jatropha Genome Database

JcCD0055831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0055831.10 + phase: 0 /partial
         (87 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g28070.1                                                       151   1e-37
Glyma16g27990.1                                                       150   2e-37
Glyma16g28030.1                                                       150   2e-37
Glyma08g08770.1                                                       135   1e-32
Glyma08g08770.2                                                       134   2e-32
Glyma05g25810.1                                                       132   8e-32
Glyma02g08910.1                                                       112   1e-25
Glyma02g47560.1                                                        87   5e-18
Glyma14g01130.1                                                        87   6e-18
Glyma12g34770.1                                                        82   1e-16
Glyma13g35800.1                                                        82   1e-16
Glyma02g47560.2                                                        74   4e-14
Glyma17g38220.2                                                        61   2e-10
Glyma17g38220.1                                                        61   2e-10

>Glyma16g28070.1 
          Length = 264

 Score =  151 bits (382), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/87 (88%), Positives = 80/87 (91%), Gaps = 1/87 (1%)

Query: 1  MATSTMALSSPSLAGKAVKLGPSAPELMGNGRVTMRKTASKNVSSGSPWYGPDRVKYLGP 60
          MA STMALSS SLAG+A+KL PS PEL G GRV+MRKTASK VSSGSPWYGPDRVKYLGP
Sbjct: 1  MAASTMALSSSSLAGQAIKLAPSTPEL-GVGRVSMRKTASKTVSSGSPWYGPDRVKYLGP 59

Query: 61 FSGEPPSYLTGEFPGDYGWDTAGLSAD 87
          FSGEPPSYLTGEFPGDYGWDTAGLSAD
Sbjct: 60 FSGEPPSYLTGEFPGDYGWDTAGLSAD 86


>Glyma16g27990.1 
          Length = 185

 Score =  150 bits (380), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 75/87 (86%), Positives = 80/87 (91%), Gaps = 1/87 (1%)

Query: 1  MATSTMALSSPSLAGKAVKLGPSAPELMGNGRVTMRKTASKNVSSGSPWYGPDRVKYLGP 60
          MA STMALSS SLAG+A+KL PS P+L G GRV+MRKTASK V+SGSPWYGPDRVKYLGP
Sbjct: 1  MAASTMALSSSSLAGQAIKLAPSTPQL-GVGRVSMRKTASKTVTSGSPWYGPDRVKYLGP 59

Query: 61 FSGEPPSYLTGEFPGDYGWDTAGLSAD 87
          FSGEPPSYLTGEFPGDYGWDTAGLSAD
Sbjct: 60 FSGEPPSYLTGEFPGDYGWDTAGLSAD 86


>Glyma16g28030.1 
          Length = 264

 Score =  150 bits (380), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 76/87 (87%), Positives = 80/87 (91%), Gaps = 1/87 (1%)

Query: 1  MATSTMALSSPSLAGKAVKLGPSAPELMGNGRVTMRKTASKNVSSGSPWYGPDRVKYLGP 60
          MA STMALSS SLAG+A+KL PS P+L G GRV+MRKTASK VSSGSPWYGPDRVKYLGP
Sbjct: 1  MAASTMALSSSSLAGQAIKLAPSTPQL-GVGRVSMRKTASKTVSSGSPWYGPDRVKYLGP 59

Query: 61 FSGEPPSYLTGEFPGDYGWDTAGLSAD 87
          FSGEPPSYLTGEFPGDYGWDTAGLSAD
Sbjct: 60 FSGEPPSYLTGEFPGDYGWDTAGLSAD 86


>Glyma08g08770.1 
          Length = 311

 Score =  135 bits (339), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/74 (89%), Positives = 69/74 (93%), Gaps = 3/74 (4%)

Query: 14 AGKAVKLGPSAPELMGNGRVTMRKTASKNVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 73
          AGKAVKLGPSAPE+   GRV+MRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF
Sbjct: 15 AGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 71

Query: 74 PGDYGWDTAGLSAD 87
          PGDYGWDTAGLSAD
Sbjct: 72 PGDYGWDTAGLSAD 85


>Glyma08g08770.2 
          Length = 263

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/74 (89%), Positives = 69/74 (93%), Gaps = 3/74 (4%)

Query: 14 AGKAVKLGPSAPELMGNGRVTMRKTASKNVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 73
          AGKAVKLGPSAPE+   GRV+MRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF
Sbjct: 15 AGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 71

Query: 74 PGDYGWDTAGLSAD 87
          PGDYGWDTAGLSAD
Sbjct: 72 PGDYGWDTAGLSAD 85


>Glyma05g25810.1 
          Length = 263

 Score =  132 bits (332), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 65/74 (87%), Positives = 68/74 (91%), Gaps = 3/74 (4%)

Query: 14 AGKAVKLGPSAPELMGNGRVTMRKTASKNVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 73
          AGKAVKLGPSAPE+   GRV+MRKT +K  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEF
Sbjct: 15 AGKAVKLGPSAPEV---GRVSMRKTVTKQASSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 71

Query: 74 PGDYGWDTAGLSAD 87
          PGDYGWDTAGLSAD
Sbjct: 72 PGDYGWDTAGLSAD 85


>Glyma02g08910.1 
          Length = 252

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 62/73 (84%), Gaps = 1/73 (1%)

Query: 1  MATSTMALSSPSLAGKAVKLGPSAPELMGNGRVTMRKTASKNVSSGSPWYGPDRVKYLGP 60
          MA STMALSS SLAG+A+KL PS PEL G GRV+MRKTA K VSSGSPWYGPDRVKYLGP
Sbjct: 1  MAASTMALSSSSLAGQAMKLAPSTPEL-GVGRVSMRKTAPKTVSSGSPWYGPDRVKYLGP 59

Query: 61 FSGEPPSYLTGEF 73
          FSGE PSYLT  F
Sbjct: 60 FSGEAPSYLTETF 72


>Glyma02g47560.1 
          Length = 265

 Score = 86.7 bits (213), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/59 (71%), Positives = 45/59 (76%), Gaps = 2/59 (3%)

Query: 29 GNGRVTMRKTASKNVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 87
          G GR  MR+T     +  S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 31 GKGRTNMRRTVKS--APQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSAD 87


>Glyma14g01130.1 
          Length = 265

 Score = 86.7 bits (213), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 42/59 (71%), Positives = 45/59 (76%), Gaps = 2/59 (3%)

Query: 29 GNGRVTMRKTASKNVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 87
          G GR  MR+T     +  S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 31 GKGRTNMRRTVKS--APQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSAD 87


>Glyma12g34770.1 
          Length = 268

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/60 (66%), Positives = 42/60 (70%), Gaps = 9/60 (15%)

Query: 28 MGNGRVTMRKTASKNVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 87
          MG G+ TM             WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSAD
Sbjct: 38 MGTGKYTM---------GNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSAD 88


>Glyma13g35800.1 
          Length = 267

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/60 (66%), Positives = 42/60 (70%), Gaps = 9/60 (15%)

Query: 28 MGNGRVTMRKTASKNVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 87
          MG G+ TM             WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSAD
Sbjct: 37 MGTGKYTM---------GNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSAD 87


>Glyma02g47560.2 
          Length = 223

 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 35/38 (92%)

Query: 50 YGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 87
          YGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 8  YGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSAD 45


>Glyma17g38220.2 
          Length = 331

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 31/41 (75%)

Query: 47  SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 87
           S WYG DR ++LGP S E PSYLTGE PGDYG+D AGL  D
Sbjct: 103 SFWYGEDRPRWLGPISYEYPSYLTGELPGDYGFDIAGLGQD 143


>Glyma17g38220.1 
          Length = 332

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 31/41 (75%)

Query: 47  SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 87
           S WYG DR ++LGP S E PSYLTGE PGDYG+D AGL  D
Sbjct: 104 SFWYGEDRPRWLGPISYEYPSYLTGELPGDYGFDIAGLGQD 144