Jatropha Genome Database

JcCD0051196.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0051196.10 - phase: 0 /pseudo/partial
         (309 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g26170.1                                                       149   5e-36
Glyma15g36890.1                                                       147   1e-35
Glyma04g36700.1                                                       147   2e-35
Glyma04g36700.2                                                       147   2e-35

>Glyma13g26170.1 
          Length = 949

 Score =  149 bits (375), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 70/77 (90%), Positives = 72/77 (93%)

Query: 1   QSTNLLDNIWAEQRRLEALKLYYRVLEAMCTAEAQILHATNLTSLLTNERFHRCMLACSX 60
           QS NL+DNIWAEQRRLEALKLYYRVLEAMC AEAQ+LHATNLTSLLTNERFHRCMLACS 
Sbjct: 421 QSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQVLHATNLTSLLTNERFHRCMLACSA 480

Query: 61  ELVLAXHKTXTMLFPAV 77
           ELVLA HKT TMLFPAV
Sbjct: 481 ELVLATHKTVTMLFPAV 497



 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/65 (83%), Positives = 62/65 (95%), Gaps = 1/65 (1%)

Query: 200 RSVLVERNSFTSPVKDRLLAFSNLKSKLPPP-LQSAFASPTRPNPGGGGETCAETGINVF 258
           R+VL+ERNSFTSPVKDRLL F++LKSKLPPP LQSAFASPT+PNPGGGGETCAETGIN+F
Sbjct: 612 RNVLMERNSFTSPVKDRLLPFNSLKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINIF 671

Query: 259 FTKVL 263
           F K++
Sbjct: 672 FGKII 676


>Glyma15g36890.1 
          Length = 1005

 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 69/77 (89%), Positives = 71/77 (92%)

Query: 1   QSTNLLDNIWAEQRRLEALKLYYRVLEAMCTAEAQILHATNLTSLLTNERFHRCMLACSX 60
           QS NL+DNIWAEQRRLEALKLYYRVLEAMC AEAQ+ HATNLTSLLTNERFHRCMLACS 
Sbjct: 473 QSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQVFHATNLTSLLTNERFHRCMLACSA 532

Query: 61  ELVLAXHKTXTMLFPAV 77
           ELVLA HKT TMLFPAV
Sbjct: 533 ELVLATHKTVTMLFPAV 549



 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/65 (83%), Positives = 62/65 (95%), Gaps = 1/65 (1%)

Query: 200 RSVLVERNSFTSPVKDRLLAFSNLKSKLPPP-LQSAFASPTRPNPGGGGETCAETGINVF 258
           R+VL+ERNSFTSPVKDRLL F++LKSKLPPP LQSAFASPT+PNPGGGGETCAETGIN+F
Sbjct: 667 RNVLMERNSFTSPVKDRLLPFNSLKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINIF 726

Query: 259 FTKVL 263
           F K++
Sbjct: 727 FGKII 731


>Glyma04g36700.1 
          Length = 1014

 Score =  147 bits (370), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/77 (89%), Positives = 72/77 (93%)

Query: 1   QSTNLLDNIWAEQRRLEALKLYYRVLEAMCTAEAQILHATNLTSLLTNERFHRCMLACSX 60
           QS N++DNIWAEQRRLEALKLYYRVLEAMC AEAQ+LHATNLTSLLTNERFHRCMLACS 
Sbjct: 483 QSANVVDNIWAEQRRLEALKLYYRVLEAMCRAEAQVLHATNLTSLLTNERFHRCMLACSA 542

Query: 61  ELVLAXHKTXTMLFPAV 77
           ELVLA HKT TMLFPAV
Sbjct: 543 ELVLATHKTVTMLFPAV 559



 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/65 (80%), Positives = 58/65 (89%), Gaps = 1/65 (1%)

Query: 200 RSVLVERNSFTSPVKDRLLAFSNLKSKLPPP-LQSAFASPTRPNPGGGGETCAETGINVF 258
           R+VL+ERNSFTSPVKD LL    LKSKLPPP LQSAFASPT+PNPGGGGETCAETGIN+F
Sbjct: 677 RNVLMERNSFTSPVKDCLLPCIILKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINIF 736

Query: 259 FTKVL 263
           F K++
Sbjct: 737 FGKII 741


>Glyma04g36700.2 
          Length = 990

 Score =  147 bits (370), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/77 (89%), Positives = 72/77 (93%)

Query: 1   QSTNLLDNIWAEQRRLEALKLYYRVLEAMCTAEAQILHATNLTSLLTNERFHRCMLACSX 60
           QS N++DNIWAEQRRLEALKLYYRVLEAMC AEAQ+LHATNLTSLLTNERFHRCMLACS 
Sbjct: 459 QSANVVDNIWAEQRRLEALKLYYRVLEAMCRAEAQVLHATNLTSLLTNERFHRCMLACSA 518

Query: 61  ELVLAXHKTXTMLFPAV 77
           ELVLA HKT TMLFPAV
Sbjct: 519 ELVLATHKTVTMLFPAV 535



 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/65 (80%), Positives = 58/65 (89%), Gaps = 1/65 (1%)

Query: 200 RSVLVERNSFTSPVKDRLLAFSNLKSKLPPP-LQSAFASPTRPNPGGGGETCAETGINVF 258
           R+VL+ERNSFTSPVKD LL    LKSKLPPP LQSAFASPT+PNPGGGGETCAETGIN+F
Sbjct: 653 RNVLMERNSFTSPVKDCLLPCIILKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINIF 712

Query: 259 FTKVL 263
           F K++
Sbjct: 713 FGKII 717