Jatropha Genome Database

JcCC0408522.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCC0408522.10 - phase: 0 /pseudo/partial
         (260 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g36890.1                                                       406   e-113
Glyma13g26170.1                                                       395   e-110
Glyma04g36700.2                                                       389   e-108
Glyma04g36700.1                                                       388   e-108

>Glyma15g36890.1 
          Length = 1005

 Score =  406 bits (1043), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/233 (87%), Positives = 214/233 (91%), Gaps = 7/233 (3%)

Query: 1   EAQILHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI 60
           EAQ+ HATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI
Sbjct: 505 EAQVFHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI 564

Query: 61  ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPSLSAEINRLGLLAE 120
           ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL VARPSLSAEINRLGLLAE
Sbjct: 565 ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVARPSLSAEINRLGLLAE 624

Query: 121 PMPSLDAIAMRINFSSGGLPPMPSLQKHELCPGQNGDIRSPKRSCPDYRSVLVERNSFTS 180
           PMPSLD IAM INFS GGLPP+P+L K E  P QNGDIRSPK      R+VL+ERNSFTS
Sbjct: 625 PMPSLDEIAMHINFSCGGLPPVPTLPKLESSPTQNGDIRSPK------RNVLMERNSFTS 678

Query: 181 PVKDRLLAFSNLKSKL-PPPLQSAFASPTRPNPGGGGETCAETGINVFFTKVL 232
           PVKDRLL F++LKSKL PPPLQSAFASPT+PNPGGGGETCAETGIN+FF K++
Sbjct: 679 PVKDRLLPFNSLKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINIFFGKII 731


>Glyma13g26170.1 
          Length = 949

 Score =  395 bits (1014), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 200/233 (85%), Positives = 211/233 (90%), Gaps = 10/233 (4%)

Query: 1   EAQILHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI 60
           EAQ+LHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI
Sbjct: 453 EAQVLHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI 512

Query: 61  ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPSLSAEINRLGLLAE 120
           ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL VARPSLSAEINRLGLLAE
Sbjct: 513 ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVARPSLSAEINRLGLLAE 572

Query: 121 PMPSLDAIAMRINFSSGGLPPMPSLQKHELCPGQNGDIRSPKRSCPDYRSVLVERNSFTS 180
           PMPSLD IAM INFS GGLPP    +  +L   QNGDIRSPK      R+VL+ERNSFTS
Sbjct: 573 PMPSLDEIAMHINFSCGGLPP---FELEDLKSYQNGDIRSPK------RNVLMERNSFTS 623

Query: 181 PVKDRLLAFSNLKSKL-PPPLQSAFASPTRPNPGGGGETCAETGINVFFTKVL 232
           PVKDRLL F++LKSKL PPPLQSAFASPT+PNPGGGGETCAETGIN+FF K++
Sbjct: 624 PVKDRLLPFNSLKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINIFFGKII 676


>Glyma04g36700.2 
          Length = 990

 Score =  389 bits (998), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/233 (85%), Positives = 209/233 (89%), Gaps = 7/233 (3%)

Query: 1   EAQILHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI 60
           EAQ+LHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI
Sbjct: 491 EAQVLHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI 550

Query: 61  ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPSLSAEINRLGLLAE 120
           ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM+NSL VARPSLSAEIN LGLLAE
Sbjct: 551 ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMHNSLAVARPSLSAEINSLGLLAE 610

Query: 121 PMPSLDAIAMRINFSSGGLPPMPSLQKHELCPGQNGDIRSPKRSCPDYRSVLVERNSFTS 180
           PMPSLD IAM INFS GGLPP+P+L K E    QNGDIRSPK      R+VL+ERNSFTS
Sbjct: 611 PMPSLDEIAMHINFSCGGLPPVPTLPKLESPSNQNGDIRSPK------RNVLMERNSFTS 664

Query: 181 PVKDRLLAFSNLKSKL-PPPLQSAFASPTRPNPGGGGETCAETGINVFFTKVL 232
           PVKD LL    LKSKL PPPLQSAFASPT+PNPGGGGETCAETGIN+FF K++
Sbjct: 665 PVKDCLLPCIILKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINIFFGKII 717


>Glyma04g36700.1 
          Length = 1014

 Score =  388 bits (997), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/233 (85%), Positives = 209/233 (89%), Gaps = 7/233 (3%)

Query: 1   EAQILHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI 60
           EAQ+LHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI
Sbjct: 515 EAQVLHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI 574

Query: 61  ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPSLSAEINRLGLLAE 120
           ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM+NSL VARPSLSAEIN LGLLAE
Sbjct: 575 ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMHNSLAVARPSLSAEINSLGLLAE 634

Query: 121 PMPSLDAIAMRINFSSGGLPPMPSLQKHELCPGQNGDIRSPKRSCPDYRSVLVERNSFTS 180
           PMPSLD IAM INFS GGLPP+P+L K E    QNGDIRSPK      R+VL+ERNSFTS
Sbjct: 635 PMPSLDEIAMHINFSCGGLPPVPTLPKLESPSNQNGDIRSPK------RNVLMERNSFTS 688

Query: 181 PVKDRLLAFSNLKSKL-PPPLQSAFASPTRPNPGGGGETCAETGINVFFTKVL 232
           PVKD LL    LKSKL PPPLQSAFASPT+PNPGGGGETCAETGIN+FF K++
Sbjct: 689 PVKDCLLPCIILKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINIFFGKII 741